Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01879 ATGGCTTCTATACATGAAAAATTTACCGAAGTTTTTTGTTCTTGTATTTGTGACCAATGTTTTATCTTCTTTCTTCTTGCTATTGTTGTGTTGAAGCTAGCAAGAAGAGCCAAAATCAAAGCCAATATCAATCTGCCTCCATCCCCAAGAAAGCTGCCAATCATTGGCAATCTTCATCAGATAGGACCATTGCCATACCGCTCTTTCAGAGCCCTCTCACAAAAGCATGGTTCTCTGATGTGGTTGCAGTTGGGGCAGACTCAAACTTTGGTGGTTTCATCACCAGATTTGGTCAGGGAAATCATCCAAACTCATGACTTAATTTTCTCAAACCGACCCAAATTCACAGCAGCAAGATACATCTTGTATGGATGTAATAACATTGGTTTTGCTTCTTATGGAGAAAGCTGGAAACTGAAAAGAAAAATATGTGTCCTTGAACTTCTTAGCTTCAAAAGGGTGCAGTCATTTAGTGTCATCAGGGAAGAAGAGGTTGCAGAACTGGTTAGAAAGATAAGTGAAGCAATGATGAGAGATGCATCCTCTATGAATCTAAGTGAGTTGCTCCTTGAAGCAGCAGACAACATCATCTGTAAATGTGCTCTTGGAAAGAAGTACACTAACAGCAGGATCAAAGAGCTTGCAAGGAAAGTAATGATTCAACTTACAGTTGTCACTGTAGGGGATCGCTTTCCTTTGTTGAGCTGGGTTGATTCTCTAACTGGAAGAATTCAGCAATTCAAGGCCACTTTTAGAGCATTTGATGCCTTATTTGATGAGGTAATTGCAGAGCATAAGAAGGTGCAGAGGGAAGCTGATCACTGCTCCACTGAGAAAGACTTTGTGGATATCCTCCTCCAACACCAGAAGGGTGGCATGCCTGACTCTCAGCTCACCAACAATGACATCAAATCAATTCTATTGGATATGTTTGCAGCAGGAAGTGATACAACTGCATCAACACTAGAATGGGCTATGACAGAGCTGATGAGAAATCCAATGAAAATGAAGAAAGCCCAGGAAGAGGTGAGAAAAGTTGTAGGGCATAAATCAAAAGTAGAAGAAGATGACATAAACCAAATGGAGTACATGAAATGTGTAGTCAAAGAAACTCTAAGGATGTATCCAGCAGCTCCTCTCTTGGCTCCTAGAGAGACATCATCTAATGTGAGAATCAGAGGATATGATATTCCAGCAAAAACACTGGTATATGTTAATGCATGGGCAATTCAGAGGGACCCTGAACTCTGGGAAAGGCCTGAAGAGTTCATTCCAGAGAGACATGGTAATAACCAGGTTCCTTCCAAAGGCCAATATATTCCATTTGGTTTTGGGAGAAGGGCATGCCCTGGAATGACCTTTGGACTTGCTTCTGTTGAGTATATGCTGGCCAACCTTCTTTATTGGTTCAATTGGAAGCTCCCTACATCTTATACATCTGCACAAGACATTGACATTACTGAGAGATACGGCCTCGTTACCTCCAAAAAAATGCCACTTCATCTCAAACCAGTTCCATTTTCATTTTGA 1530 0.4118 MASIHEKFTEVFCSCICDQCFIFFLLAIVVLKLARRAKIKANINLPPSPRKLPIIGNLHQIGPLPYRSFRALSQKHGSLMWLQLGQTQTLVVSSPDLVREIIQTHDLIFSNRPKFTAARYILYGCNNIGFASYGESWKLKRKICVLELLSFKRVQSFSVIREEEVAELVRKISEAMMRDASSMNLSELLLEAADNIICKCALGKKYTNSRIKELARKVMIQLTVVTVGDRFPLLSWVDSLTGRIQQFKATFRAFDALFDEVIAEHKKVQREADHCSTEKDFVDILLQHQKGGMPDSQLTNNDIKSILLDMFAAGSDTTASTLEWAMTELMRNPMKMKKAQEEVRKVVGHKSKVEEDDINQMEYMKCVVKETLRMYPAAPLLAPRETSSNVRIRGYDIPAKTLVYVNAWAIQRDPELWERPEEFIPERHGNNQVPSKGQYIPFGFGRRACPGMTFGLASVEYMLANLLYWFNWKLPTSYTSAQDIDITERYGLVTSKKMPLHLKPVPFSF 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01879 509 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 Pfam Cytochrome P450 46 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 SUPERFAMILY Cytochrome P450 46 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01879 509 PANTHER CYTOCHROME P450 71B11-RELATED 30 505 - -
Spst5g01879 509 CDD CYP71-like 75 500 - -
Spst5g01879 509 FunFam Cytochrome P450 83B1 33 503 - -
Spst5g01879 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Spst5g01879 509 Gene3D Cytochrome P450 30 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01879 Spst-Chr5 54500892 54502878 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01879 20 505 Cytochrome P450 AT5G25120 43.058 2.18e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01879 K20617 - gmx:100785621 745.347