Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01839 ATGGCTCAGAAAACCGAGAACGAAGAAACCGACTTCAAGGTTCCCGAAACGATTACTCTCTGCGTTAACAACTGCGGCGTCACCGGGAACCCCGCCACCAACAACATGTGCCAGAAGTGCTTCACCGCCTTCACCGCCTCCACCGCCACAACCTCCGGTGCCATCTCCTCTCCTTCTGCCAGATCCGCTCTCTCCGCGCGTCCTCAGAAGAGATCCTTCCCCGAAGAGCCTTCCTCAACGCCGGATCCTCCCTCCTCCGACCAAAACACGCCTTCCGAGGCCAAACGCGTCGTTAACCGCTGCTCCGGCTGCCGGCGGAAGGTCGGACTCACCGGATTCCGTTGCCGGTGCGGTGAACTCTTCTGCGCCGAACATCGGTATTCCGACCGCCACGACTGTAGCTACGACTACAAAGCCGCCGGTAGAGAAGCCATCGCCAGGGAGAATCCGGTGGTCAGAGCCGCGAAGATCGTCAAAGTCTGA 483 0.5983 MAQKTENEETDFKVPETITLCVNNCGVTGNPATNNMCQKCFTAFTASTATTSGAISSPSARSALSARPQKRSFPEEPSSTPDPPSSDQNTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKAAGREAIARENPVVRAAKIVKV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01839 160 Gene3D - 75 156 IPR035896 -
Spst5g01839 160 Pfam AN1-like Zinc finger 101 138 IPR000058 GO:0008270
Spst5g01839 160 ProSiteProfiles Zinc finger A20-type profile. 15 49 IPR002653 GO:0003677|GO:0008270
Spst5g01839 160 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 159 - -
Spst5g01839 160 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 20 54 - -
Spst5g01839 160 SMART AN1_Zf_4 101 138 IPR000058 GO:0008270
Spst5g01839 160 FunFam Zinc finger AN1-type containing 6 75 156 - -
Spst5g01839 160 SMART A20_3 18 42 IPR002653 GO:0003677|GO:0008270
Spst5g01839 160 MobiDBLite consensus disorder prediction 50 95 - -
Spst5g01839 160 Pfam A20-like zinc finger 20 41 IPR002653 GO:0003677|GO:0008270
Spst5g01839 160 SUPERFAMILY AN1-like Zinc finger 85 154 IPR035896 -
Spst5g01839 160 Gene3D - 1 68 - -
Spst5g01839 160 ProSiteProfiles Zinc finger AN1-type profile. 95 141 IPR000058 GO:0008270
Spst5g01839 160 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01839 Spst-Chr5 54115895 54116377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01839 8 160 C2H2 Transcription Factor Family AT3G52800 37.791 4.28e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01839 - - vum:124827556 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01839 5 54115895 54116377 Spst5g01839 5 54115895 54116377 ECH