Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01823 ATGGTTGGAGAAAAGAATATCAACATAGCTAGTGTGAAACAAGGAATTTCAATGATGCAACATAGACTACGGCAGAAGAAGATTCTTTTGATTATAGATGATGTCGACAAGCACGAGCAGTTGCAGGCAATTGCTGGAAACCCTGATTGGTTTGGTCCCGGCAGTAGGGTCATCATCACAACTAGGGACAAACAATTGTTGTCATCTCACTTGGTTGAAAAAACATATAAAGTGAAAAAGTTGAAAAAGAAGGATGCTCTTCGACTGCTTAGTTGGAAAGGTTTTAAAACAGAAAAAGTTGATACAGGTTATGTGAATGTTATGGATCGTGTACTAACTTATGCTTCTGGCCATCCATTGGCTTTGGAAGTAATAGGTTCGAAGTTGTTTAGAAAAAGTATACAAGAGTGGGAATCTGCCATCAATCAGTATGAAAAAATTCCTAACAATCAAATCCTGGAGATGCTTAAAATAAGTTTTGATGCTTTAGATGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGTTTCAAAGGATTTGCATTGGCAGAGGTGGAAGATATACTCCGTGCTCATTATGGTGCTTGCATGAAATATCACATTGGGGTGTTGGTTGAAAAATCTCTCATAAAATATACTTGGAATTCTACAGTTACGTTGCATGACTTGATAGAGGACATGGGTAAAGAAATTGTCAGACAGAAATCACCAAAAGAGCCAGGGAAGCGCAGTAGATTATGGTCACCAGAAGATATAATTCAAGTTTTGGAAGACAACTCGGGAACTGGAGAAATTGAAATCATATGTTTGAATTCCTCCTTACTTGACAAAGAAGAAACAGTAGAATGGAATAGAAAGGCTTTCAAGAAGATGAAAAACCTAAAAACACTAATTATTAAAAATGGTAATTTTTCCGAAGGTCCAAAATATCTTCCAAATTGTCTAAGAGTACTGGAATGGTGGAAATATCCTTCACAAGGTTTACCACCAGATTTTCGTTCAAAGAAACTTGCCATTCTTGAGAGCTTCCCAGAAATATTGGGAAAAATGGAAAAAATAACAGAACTTGTGTTGGAGGCCTGTGACATAAAAGAGTTGCCATTTTCATTTCAAAATCTCACTGGGCTTCAAACATTAGAGTTGCGTTTCTGTGGAAGGTTAAGGTTACCAAGTAGCATTGTCATGATGCCAAAATTGGCTCAGATTATTGCTTGGGAATCGAAAGGGTGGCTATTTCCAAAACAGGTTGAGGGTGAAGAGAAAGTAAGCTCAATGGTGTCTTCAAATGTAGATTGTATTCGTCTCTCAGGCTGCAAACTCTCAGATGAATTTGTCCAAATAGCTCTTAAACTGCATGAGGCTGGAAACACCATGTTTCAGTTTTCAGGAGCCATGTTTCCAGAATGGTTCGAGCACCACAGTCGGGGACCATCTTATTCGTTCTGGGTTGGCAACAAATTCCCTGCAATTGCTCTTTGTATTACTATTGGACCAACTCATCTGAAATATGTTGAAATTGTTGGACCTATCATGGTCATCAATGGCATTGAATGTTCACTTGATGAGGAGGATGATCCCTATTTATGTATGCTCCCTGATCACACTTATCTTTTCGATCTGCAACAGATATTTTTTGCAGATTATCTAGACAGATTTGTGTCAGAAAATGAATGGAACCATGTTGAGATTACATACTTAGTCAAGCAGAGATTCAATAAAAAAGACAAACATGTGATCTCGGTCTTCATAGAAAATGGAATCTATGCGCTCAAACAGAGGAGCAGCACGGAGGATATTCTTATTCAATTCACTGATCCCCACAAAAAGAGAAGATTAGATGTTGATTCAGAGATGTAA 1860 0.378 MVGEKNINIASVKQGISMMQHRLRQKKILLIIDDVDKHEQLQAIAGNPDWFGPGSRVIITTRDKQLLSSHLVEKTYKVKKLKKKDALRLLSWKGFKTEKVDTGYVNVMDRVLTYASGHPLALEVIGSKLFRKSIQEWESAINQYEKIPNNQILEMLKISFDALDEEEKSVFLDIACCFKGFALAEVEDILRAHYGACMKYHIGVLVEKSLIKYTWNSTVTLHDLIEDMGKEIVRQKSPKEPGKRSRLWSPEDIIQVLEDNSGTGEIEIICLNSSLLDKEETVEWNRKAFKKMKNLKTLIIKNGNFSEGPKYLPNCLRVLEWWKYPSQGLPPDFRSKKLAILESFPEILGKMEKITELVLEACDIKELPFSFQNLTGLQTLELRFCGRLRLPSSIVMMPKLAQIIAWESKGWLFPKQVEGEEKVSSMVSSNVDCIRLSGCKLSDEFVQIALKLHEAGNTMFQFSGAMFPEWFEHHSRGPSYSFWVGNKFPAIALCITIGPTHLKYVEIVGPIMVINGIECSLDEEDDPYLCMLPDHTYLFDLQQIFFADYLDRFVSENEWNHVEITYLVKQRFNKKDKHVISVFIENGIYALKQRSSTEDILIQFTDPHKKRRLDVDSEM 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01823 619 SUPERFAMILY L domain-like 276 443 - -
Spst5g01823 619 Gene3D - 80 164 IPR042197 -
Spst5g01823 619 Gene3D Ribonuclease Inhibitor 250 453 IPR032675 -
Spst5g01823 619 Gene3D - 2 76 IPR027417 -
Spst5g01823 619 Pfam NB-ARC domain 15 148 IPR002182 GO:0043531
Spst5g01823 619 PRINTS Disease resistance protein signature 22 36 - -
Spst5g01823 619 PRINTS Disease resistance protein signature 115 129 - -
Spst5g01823 619 PRINTS Disease resistance protein signature 372 388 - -
Spst5g01823 619 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 446 IPR044974 GO:0006952
Spst5g01823 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 174 IPR027417 -
Spst5g01823 619 SUPERFAMILY "Winged helix" DNA-binding domain 151 258 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01823 Spst-Chr5 53991789 53994497 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01823 4 333 WRKY Transcription Factor Family AT5G45050 33.053 4.78e-46 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01823 - - gmx:100780257 513.457