Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01762 ATGACATCAAAACCTGCCAAGATGCCTGATTTACCACCTGAGATGAGCCACGATATGTCAGACGAGGCAAACAGTAGTGCTTATAGCAGTTGTGTAACTTCAGGAAACAACTCACCAACTCATCCCAAATATATGAAACAAGCAGTAAAAGAGACATACTACAACTCAGGAAGTGAAACTGGACAATTGGACCAGGTTTACAAACCTGATCATTCAAAGTTTGAAGGTAGGTCAAGACCCCAGAAGATAATGCCACCAAACAGGAATATATCTGATTTCAACCCTCAACACCAAAGTCCAAGCACTAAGAGGCCTGGTCCAGAGCATCATCATGTAAAGGCAATGTCTGTGTCCACCCCACATTCAAAGACCCCGAGTCAAGGGAGTTGTGCTAGTTCTCGCAGTAACAGCCTAGAGAGCACAAGTGCGCCCATTAGGCCACACACTGGGGGTGATGTGAGGTGGGAAGCTATCAACATGATTTCAAGGTGTGGCTCTATCAATCTCAGCCACTTCAGGCTTCTCAAACGCATTGGTTATGGAGACATTGGGAGTGTGTACCTTGTGGAACTCAAAGGAACTAGGACCTACTTTGCCATGAAAGTCATGGACAAGGCAGCACTCATAAGCAGAAACAAGCTTCTGAGGGCACAGACAGAAAGGGAGATTCTTGGACTCCTTGATCACCCCTTTCTCCCGACTCTGTATTCTTACTTTGAAACTGACAAGTTTTACTGCCTGGTAATGGAGTTTTGTAGTGGAGGCGATCTTCATTCTCTTCGACAGAAGCAACCGAACAAGTGTTTCACTGAAGAAGCTGCCAGGTTCTATGCTTCAGAGGTTTTGCTAGCTCTGGAGTACCTGCACATGCTTGGCATTGTATACAGAGACTTAAAACCAGAAAATCTTCTAGTCAGAGATGAAGGGCACATCATGCTCTCAGATTTTGACTTATCCCTCCGCTGCTCCGTCTGTCCTACACTAGTCAAATCTTCATCAGCCCACGCAAGCAACAGTAGTAGTGGCAACCATGATTCTAGTGGCATACTAAATGATGACCAAGCAGTGTCAACCACTTCTCAAGCATCGAGTTTTTTTCCGCGCATTTTGCCTTCAAAGAAGAACCGTAAGGCAAAATCAGATTTTGGCCTATTGGTTGGTGGTGCACGCCTGCCTGAACTGATGGCAGAACCGACCAATGTGAGATCTATGTCATTTGTAGGGACACATGAGTATCTGGCTCCCGAGATTATCAAAGGAGAGGGTCATGGTAGTGCAGTGGATTGGTGGACTTTTGGGATCTTCTTGTATGAGCTGTTGCATGGAACAACCCCTTTCAAGGGTGCAGGGTATAAAGCCACACTTTTCAATGTTGTTGGACAACCACTTAGGTTTCCAGAAAATCCCCAGGTCAGTGCAGTGGCTCGTGACCTTATTAGGGGATTGCTGGTGAAAGAGCCTCAGAAGAGAATTGCATATACAAGAGGAGCTACAGAGATAAAACAACACCCATTTTTTGAGGGAATGAACTGGGCTCTAGTTAGAAGTGCCACCCCTCCTCACATACCAGATGCTATAGACTTCTCCAGGTATGCTAGCAAAGAGACAGCACCCCCAGTCGACAAGAAGATGGCAGATATTGCTAATGATAAAAACAGCAATAATGATTCTTACGTAGATTTTGAGTATTTTTAG 1695 0.4519 MTSKPAKMPDLPPEMSHDMSDEANSSAYSSCVTSGNNSPTHPKYMKQAVKETYYNSGSETGQLDQVYKPDHSKFEGRSRPQKIMPPNRNISDFNPQHQSPSTKRPGPEHHHVKAMSVSTPHSKTPSQGSCASSRSNSLESTSAPIRPHTGGDVRWEAINMISRCGSINLSHFRLLKRIGYGDIGSVYLVELKGTRTYFAMKVMDKAALISRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGDLHSLRQKQPNKCFTEEAARFYASEVLLALEYLHMLGIVYRDLKPENLLVRDEGHIMLSDFDLSLRCSVCPTLVKSSSAHASNSSSGNHDSSGILNDDQAVSTTSQASSFFPRILPSKKNRKAKSDFGLLVGGARLPELMAEPTNVRSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGYKATLFNVVGQPLRFPENPQVSAVARDLIRGLLVKEPQKRIAYTRGATEIKQHPFFEGMNWALVRSATPPHIPDAIDFSRYASKETAPPVDKKMADIANDKNSNNDSYVDFEYF 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01762 564 FunFam Serine/threonine-protein kinase AGC1-5 170 255 - -
Spst5g01762 564 Gene3D Phosphorylase Kinase; domain 1 170 255 - -
Spst5g01762 564 CDD STKc_phototropin_like 170 527 - -
Spst5g01762 564 MobiDBLite consensus disorder prediction 1 149 - -
Spst5g01762 564 MobiDBLite consensus disorder prediction 117 144 - -
Spst5g01762 564 FunFam Serine/threonine-protein kinase AGC1-7 399 524 - -
Spst5g01762 564 PANTHER FLIPPASE KINASE 1-RELATED 37 532 - -
Spst5g01762 564 SUPERFAMILY Protein kinase-like (PK-like) 169 530 IPR011009 -
Spst5g01762 564 Gene3D Transferase(Phosphotransferase) domain 1 256 323 - -
Spst5g01762 564 SMART serkin_6 172 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01762 564 MobiDBLite consensus disorder prediction 84 102 - -
Spst5g01762 564 MobiDBLite consensus disorder prediction 19 43 - -
Spst5g01762 564 Gene3D Transferase(Phosphotransferase) domain 1 400 524 - -
Spst5g01762 564 MobiDBLite consensus disorder prediction 51 65 - -
Spst5g01762 564 FunFam serine/threonine-protein kinase D6PK-like 256 323 - -
Spst5g01762 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
Spst5g01762 564 Pfam Protein kinase domain 397 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01762 564 Pfam Protein kinase domain 173 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01762 564 ProSiteProfiles Protein kinase domain profile. 172 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01762 Spst-Chr5 53396503 53399215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01762 62 564 AGC Kinase Gene Family AT1G79250 65.774 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Spst5g01762 Pkinase 4.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01762 - - gmx:100819001 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01762 5 53396503 53399215 Spst11g00423 11 24852572 24856582 PCT