Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01753 ATGGGAACACCTGTGAACATCATCGTTGGATCACAGGTTTGGGTTGAGGATCCTGATGATGCATGGATTGATGGTGAGGTCACACAAATCAATGGCAAAACTGCCACCGTCATTACCACAAATGGGAAAAATATGGTGGCAGAAATTTCAAGCATATACCCCAAAGATACAGAAGCACCACCTGCAGGGGTTGATGACATGACCAAGCTAGCTTACCTTCATGAGCCAGGAGTCCTGCATAACCTTGCAACTCGTTTTTCTCTCAATGAGATATATCAGTACAAAGGAGCAGCATTTGGAGAGCTCAGTCCTCACCTTTTTGCTGTAGCTGACACATGTTACAGGGCAATGATAAATGAAAATGGAAGTCAATCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACTGAGACAACGAAAATGCTCATGAGATATCTAGCATTCATGGGGGGTAGATCTGCTTCAGAAGGAAGAACTGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGAAATGCCAAAACTGTCAAAAACAACAATTCAAGTCGATTTGGCAAATTTGTTGAAATTCAATTCGACAAGAATGGGAAGATTTCCGGAGCTGCAATCCGAACATATCTCCTCGAAAGGTCACGAGTTTGCCAGGTCTCTGACCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTGCAGCACCACCAGAGGATGCCAACAAGTATAAGTTAGGGGATCCAAGGCAATTCCACTATCTCAATCAATCAAACTGTTATGAAGTGTCAAATGTAGATGATGCAAAAGAATACTTGGAGACCAGAAATGCAATGGATATTGTAGGCATTAGCCAAGAAGAGCAGGATGCCATATTCCGTGTGGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTTGTGAAAGGGAAAGATGTTGATTCTTCCAAATTGAAAGATGATAAATCACTCTTCCACCTCCAAACAGCTGCAGAGTTATTCATTTGTGATGCGAAAGCACTAGAAGACTCACTTTGCAAGCGTGTCATTGTAACTCCTGATGGTAACATCACGAAACCTCTAGACCCTGATGCAGCTGCTTTGAGCCGAGATGCCTTGGCAAAGACTGTGTACTCCAAATTGTTTGATTGGATTGTGGACAAGATTAACAGTTCAATTGGTCAAGATTCCAATGCAGTGAGCATAATAGGAGTCCTTGATATTTATGGATTTGAAAGCTTCAAAATCAACAGTTTTGAGCAACTATGCATCAACTTAACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTATTCAAGATGGAGCAAGAAGAGTACACAAAGGAGGAAATCAATTGGAGCTATGTAGAATTTGTGGATAATCAGGATGTTCTTGATCTTATTGAGAAGAAACCAGGAGGAATAATCGCTCTTCTAGATGAAGCCTGCATGTTCCCAAAATCAACTCATGAGACTTTTGCACAAAAGATGTACCAGACATACAAAGCCCACAAGCGCTTCAGCAAGCCAAAACTTGCTCGAACAGATTTCACAATTAACCATTATGCTGGAGATGTCACATATCAAGCAGATTATTTTCTTGATAAAAACAAAGATTATGTTGTAGCAGAGCATCAAGCTCTTTTATGTGCTTCCAAGTGCCCATTTGTTGCTAATCTGTTCCCTCCTTTACCTGAGGAGACGTCAAAGCAATCAAAATTCTCTTCCATTGGTTCACAGTTTAAGCAACAACTGCAATCTCTCATGGAGACACTGAATACAACAGAACCACATTACATACGATGTGTGAAACCAAATACAGTTTTGCAGCCTGGGATCTTTGAGAACTTCAATGTCTTGAACCAATTAAGATGTGGTGGAGTACTTGAGGCAATAAGGATTAGTTGTGCTGGATACCCAACAAAAAGAACATTTGAAGAGTTTCTTGATCGTTTTGGAATGCTAGCCCCCGATGTCCTTGATGGCTCTGATGAGAAAAAGGCATCTATGGCCATCTGTGATAAGATGGGCTTAAAAGGCTATCAAATGGGGAAAACAAAGGTATTTCTCAGAGCAGGTCAGATGGCTGAATTGGATGCACGAAGAGCCGAAGTCTTAGCTAAAGCAGCTAAACTCATACAGAGACAAATCCGGACACATTTAACCAGAAAGGAGTTCATCACCCTAAGAAAGGCCACAATTCATATCCAGAAGATTTGGAGAGCTAAACTTGCACGTGAACTCTATGAGCATATGAGGAGAGAAGCAGCTTCTACCCGGATACAGAAACATGTGCGTGCACACAGAGCAAGAATGTATTATACATCACTACAAGCATCAGCTATAGTTATTCAATCAGGGTTGAGAGCATTTGCAGCACGAAATGAATATAGGTACAGAAGAAGAACAAAGGCTTCAACGAAAATTCAGACACAATGGAGGAAAGTCCAAGCTCTTTCTGATTACAAACATCAGAAGAGAGCAACTGTTACACTTCAGTGTCTTTGGAGAGCTAGAATTGCAAGGAAAGAGCTCAAAAAGCTTCGGATGGCTGCAAGGGAAACTGGGGCACTTAAGGAAGCAAAGGACAAGTTGGAAAAGCGTGTTGAGGAGCTTACATGGAGACTTGATATTGAAAAGCACATGAGGATGGATCTTGAAGAAGCTAAAGGGCAAGAGATTGCAAAATTGCAAAATTCTTTACAAGAAATGCAAGCGCAGCTAGATGAAGCCCATGCTGCAATTATTCACGAGAGAGAAGCAGCGAAAATAGCTATTGAACAAGCACCACCAGTAATTAAAGAGGTACCTGTTGTGGACGATACAAAGCTAGAGTTACTGACAAATAAAAATGAGGAGCTGGAGACTGAAGTAGAAGTGCTGAACAAGAAGATTAAAGAGTTTGAAGAGAAGTTCTCAGAAATTGAAAACGAGAATCAAGCAAGGCTGAAAGAGGCAGAAGAAGCACAGCTTAAAGCAACACAACTTCAGGAGACTATTGAAAGATTAGAATTGAGTTTGTCAAACCTTGAATCTGAGAACCAGGTTCTATGCCAGCAGGCTTTGGAAGAATCAAAAAATGAAGAACTCTTTGAAGAGATCAAAATCCTCAAGGGTCAGATAGCAAATCTAGAATCAGAGAACGATTTCCTACGGAGCCAGGCAGCAGGAGCTGCTTTAGAGCTGAAACTCCTTCCAGAAAAAGTAGAATCAGACCATTCAGCAGCTGCTTTAGAGCAGAAAGTTCATCCAGAAAAAATAGAGACAGTCCATTCAGAAGCCGCTTTGGAGCAGAAAGTTCATCCAGAAAAAATAGAACCAGACCAAGAAGTAGCTGCTGCAGAGAAGATAAAAGTGCAACCAAGAGTTATTGCAGATAATATGACTGCACAAATCAAGAATTTGGATAATGGAAATCAGACAGAGGAAGAATGGCATGCAAGAAAAGAACCAAGAGCACCAGTCTTCTTGCTTACCAAACAAAGATCACTCACAGATAGACAGCAGGAAAGTCATGATGCACTGCTCAAGTGTCTCACTGAAGATAAGCGATTTGAGAAAAAAAGACCAGCTGTTGCTTGTATTGTATATAAAGCACTTCTTCATTGGAGATCCCTTGAAGCAGAAAAGACACATATTTTTGATAAAATTACACATACTATCCGATCATCTATAGAGAGTCAAGAAGGAATCCATGATCTAGCCTACTGGCTTTCTACTACTTCAACACTTTTGTTTTATCTACAATGCACAATGAAGGCCAGTAATACAACTAAGTCGGTGTCTCGTAATCGAAACTCCCCTGCCACTTTGTTTGGAAAAATGGCACAAGGTTTGCGTTCATCTTCAATGGGCTTGGGGATTTCAAGTGGCTACAGTGGAATGGTGGAGAAACCGAATGATCAGTCTAAAGTAGAAGCCAAATATCCGGCTATTCTGTTTAAGCAACATTTAACTGCATATGTTGAGAAGATATATGGAATGATCCGTGATAGTTTGAAGAAAGAGATTAGCCCATTCTTAAATTTGTGTATACAGGCACCAAGATCCATAAGGAATAGATCAATAAGAGGTTCATCCAGAAACATCCATTCAAATATTGTTGCAAAACAACAAGCATTACATATGTATTGGAAAGGCATTGTGGACAAGTTAGATCATGCGTTGCGTATATTGTCTGATAACTATGTCCCTCCCATCATAACAAGAAAGATATTTAGTCAGGTTTTCTCGTTCATGAATGTCCAGCTCTTTAATAGTTTGTTGCTTCGTCGTGAGTGTTGTTCCTTCAGCAATGGAGAATATTTGAAGGCAGGTTTGCATGAGTTGGAACTGTGGTGTCTTAAAGCAACAGACCAGTTTGCTGGTTCATCTTGGGATGAACTCAAACATATACGCCAAGCTGTGGGATTTCTGGTTTTACATCAGAAGACTCAAAAATCACTAGAGGAGATCACAAATGAGCTCTGCCCGATGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGATGACAAGTATGGAGCACAGGGACTATCTGCAGAAGTCATTAGCAGAATGAGAGTGATTATGACAGAAGACTCAATAAGCATACATAACAGCTCATTCCTTCTAGAGGTGGATTCCAGCATACCATTCTTAATGGAGGAGATGTTTCGGTCCATGAGTGACATCCGCCTATCAGACATGGATGTGGATCCACCACCAAACCTCAGGCAAAGGTCTGACTTCCAATTCTTGTTGCAACAAATGGATAGTGACTCTCAGTGA 4785 0.4071 MGTPVNIIVGSQVWVEDPDDAWIDGEVTQINGKTATVITTNGKNMVAEISSIYPKDTEAPPAGVDDMTKLAYLHEPGVLHNLATRFSLNEIYQYKGAAFGELSPHLFAVADTCYRAMINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSASEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDANKYKLGDPRQFHYLNQSNCYEVSNVDDAKEYLETRNAMDIVGISQEEQDAIFRVVAAILHLGNIDFVKGKDVDSSKLKDDKSLFHLQTAAELFICDAKALEDSLCKRVIVTPDGNITKPLDPDAAALSRDALAKTVYSKLFDWIVDKINSSIGQDSNAVSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADYFLDKNKDYVVAEHQALLCASKCPFVANLFPPLPEETSKQSKFSSIGSQFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFEEFLDRFGMLAPDVLDGSDEKKASMAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAAKLIQRQIRTHLTRKEFITLRKATIHIQKIWRAKLARELYEHMRREAASTRIQKHVRAHRARMYYTSLQASAIVIQSGLRAFAARNEYRYRRRTKASTKIQTQWRKVQALSDYKHQKRATVTLQCLWRARIARKELKKLRMAARETGALKEAKDKLEKRVEELTWRLDIEKHMRMDLEEAKGQEIAKLQNSLQEMQAQLDEAHAAIIHEREAAKIAIEQAPPVIKEVPVVDDTKLELLTNKNEELETEVEVLNKKIKEFEEKFSEIENENQARLKEAEEAQLKATQLQETIERLELSLSNLESENQVLCQQALEESKNEELFEEIKILKGQIANLESENDFLRSQAAGAALELKLLPEKVESDHSAAALEQKVHPEKIETVHSEAALEQKVHPEKIEPDQEVAAAEKIKVQPRVIADNMTAQIKNLDNGNQTEEEWHARKEPRAPVFLLTKQRSLTDRQQESHDALLKCLTEDKRFEKKRPAVACIVYKALLHWRSLEAEKTHIFDKITHTIRSSIESQEGIHDLAYWLSTTSTLLFYLQCTMKASNTTKSVSRNRNSPATLFGKMAQGLRSSSMGLGISSGYSGMVEKPNDQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRNRSIRGSSRNIHSNIVAKQQALHMYWKGIVDKLDHALRILSDNYVPPIITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELELWCLKATDQFAGSSWDELKHIRQAVGFLVLHQKTQKSLEEITNELCPMLSIPQIYRIGTMFWDDKYGAQGLSAEVISRMRVIMTEDSISIHNSSFLLEVDSSIPFLMEEMFRSMSDIRLSDMDVDPPPNLRQRSDFQFLLQQMDSDSQ 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01753 1594 SMART iq_5 730 752 IPR000048 GO:0005515
Spst5g01753 1594 SMART iq_5 778 800 IPR000048 GO:0005515
Spst5g01753 1594 SMART iq_5 826 848 IPR000048 GO:0005515
Spst5g01753 1594 SMART iq_5 707 729 IPR000048 GO:0005515
Spst5g01753 1594 SMART iq_5 803 825 IPR000048 GO:0005515
Spst5g01753 1594 SMART iq_5 755 777 IPR000048 GO:0005515
Spst5g01753 1594 PRINTS Myosin heavy chain signature 403 431 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 PRINTS Myosin heavy chain signature 456 484 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 PRINTS Myosin heavy chain signature 123 148 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 PRINTS Myosin heavy chain signature 170 197 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 PANTHER MYOSIN 54 1518 - -
Spst5g01753 1594 Coils Coil 697 717 - -
Spst5g01753 1594 Coils Coil 946 1022 - -
Spst5g01753 1594 ProSiteProfiles IQ motif profile. 756 782 IPR000048 GO:0005515
Spst5g01753 1594 ProSiteProfiles IQ motif profile. 827 856 IPR000048 GO:0005515
Spst5g01753 1594 Pfam Myosin N-terminal SH3-like domain 10 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 758 IPR027417 -
Spst5g01753 1594 ProSiteProfiles Myosin motor domain profile. 93 705 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 Coils Coil 889 923 - -
Spst5g01753 1594 FunFam unconventional myosin-Va 807 854 - -
Spst5g01753 1594 FunFam unconventional myosin-Va 759 806 - -
Spst5g01753 1594 ProSiteProfiles IQ motif profile. 731 760 IPR000048 GO:0005515
Spst5g01753 1594 Gene3D - 226 284 - -
Spst5g01753 1594 SMART DIL_2 1406 1513 IPR002710 -
Spst5g01753 1594 FunFam unconventional myosin-Va 710 758 - -
Spst5g01753 1594 Pfam DIL domain 1407 1510 IPR002710 -
Spst5g01753 1594 Coils Coil 1029 1063 - -
Spst5g01753 1594 Gene3D Kinesin motor domain 65 636 IPR036961 -
Spst5g01753 1594 FunFam Class V myosin 413 552 - -
Spst5g01753 1594 Gene3D - 641 703 - -
Spst5g01753 1594 FunFam Myosin 2 286 403 - -
Spst5g01753 1594 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Spst5g01753 1594 CDD MYSc_Myo11 76 693 IPR036018 -
Spst5g01753 1594 ProSiteProfiles Dilute domain profile. 1217 1531 IPR002710 -
Spst5g01753 1594 SMART MYSc_2a 56 706 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 FunFam Myosin heavy chain 226 281 - -
Spst5g01753 1594 CDD MyosinXI_CBD 1168 1554 IPR037975 GO:0007015
Spst5g01753 1594 Pfam IQ calmodulin-binding motif 758 776 IPR000048 GO:0005515
Spst5g01753 1594 Pfam IQ calmodulin-binding motif 781 800 IPR000048 GO:0005515
Spst5g01753 1594 Pfam IQ calmodulin-binding motif 732 751 IPR000048 GO:0005515
Spst5g01753 1594 Pfam IQ calmodulin-binding motif 710 728 IPR000048 GO:0005515
Spst5g01753 1594 Pfam IQ calmodulin-binding motif 829 848 IPR000048 GO:0005515
Spst5g01753 1594 ProSiteProfiles IQ motif profile. 708 735 IPR000048 GO:0005515
Spst5g01753 1594 Coils Coil 850 884 - -
Spst5g01753 1594 Gene3D - 413 597 - -
Spst5g01753 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 759 856 IPR027417 -
Spst5g01753 1594 Gene3D Myosin VI head, motor domain, U50 subdomain 286 575 - -
Spst5g01753 1594 Gene3D - 806 855 - -
Spst5g01753 1594 Gene3D - 706 758 - -
Spst5g01753 1594 Gene3D - 759 805 - -
Spst5g01753 1594 Pfam Myosin head (motor domain) 91 693 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst5g01753 1594 ProSiteProfiles IQ motif profile. 779 808 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01753 Spst-Chr5 53254428 53266243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01753 93 1589 Myosins gene family AT2G31900 70.914 0.0 2178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01753 K10357 - gmx:100786418 2856.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01753 5 53254428 53266243 Spst5g01753 5 53254428 53266243 ECH