Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01741 ATGTGGGATAGAAAGGCTGATTTCCGAAAGATAGGGTTTGCAAATTCTCTTGCAGAAGTTGGAAGAAACAACCTTAAGACTTCGATTGAAAGTTCACAGGAGGCTGCTAAGAAGTCCCTGGAAAAAGCTACTGAGCGTGTGAGATGCCTTGAGGATGATTTAGCAAAGTCCAGGAGTGAGATTATAGTATTACGATCAGAGCGTGACAAGATGGCACTTGAAGCAAATTTTGCAAGAGAGAGACTTGATAGCTTTATGAAAGAATTGGAACATCAGGCATGTCCTTCTGAAGCAAAAGGTGTCTTACAAAGAAATGTAGAGTTTTCTCAGCTTGTTGTTGAATACCAACGAAAGTTACGTGAAAGCTCTGAGTCATTGATTGCTGCTGAGGAGCTTTCTCGGAAACTTACTATGGAGTTGTCAGTTTTAAAACAAGAAAAGGAAGTCATATCAAATGCTGAAAAAAGAGCTTCTAACGAGGTTTGCAGTTTGTCTGAAAGAGTGCAGCGTTTGCAGGCTAGTTTGGGTACTATACAGAGTACTGAGGAAGTTCGAGAGGAAGCAAGAGCTGCAGAGAGGGCTAAGCAAGAAGAATATATAAGGAAATTGGAGAGGGAATGGGCTGAGGCCAAGCAAGATTTAAATGAAGAGCGGGAAAATGTGAGAAGATTCACACTAGATCGGGACCAGACCATAAAAAATTCTCTGAGACAGGTTGAGGATATGAGCAAAGAGTTAGCCAATGCATTGCATGCGGTTGCATCTGCTGAATCCAGGGCTGCTGTTGCTGAGGCAAAACTCTCCAGTCTTCACAGAAAATTGGGTTCCTCAGATGACAAGCTTGTCGAAATGGGTGGAGAGAGTGGACCTTCCACTTTATCAAGTGATAAGGTTGTTGTTAGTGAATTGCAAAAGGCAAAGGAGGAGATAGAAAAGTTTAAAGAGGAAGCACATGCCAACAAAGTTCACATGCTGCAGTATAAAAGCATTGCTGAGGTAAATGAAGATGCACTGAAACAGATAGAAATGGCACATGAGAAGTTTAAAACTGAGGCTGAAGAAACAAAGAAAGTTCTAGAATCTGAACTTCATTCACTCAGAGAGAAGATGTTAGAGATTGAAAATGAATCTAGTTTGAAATACAAAGAAGTTGCTTCTGAAACTGTGGGAAAGGAAGAAGCTCTTACATCGGCTATGGCTGAAATCACAAATCTTAAAGAAGAAATTTTAACGAAATCTTCCCAAATTTCAGCATTGGAGATTCAATTATCGGGTTTAAAGGAAAACCTCGATAGGGAGCATCAGAAATGGCGTGCTGCTCAAACCAATTATGAAAGACAGGTTGTTCTGCAGTCTGAAACGATTCAGGAGTTGACGAAAACATCTGAAGCACTAGCCTTGCTGCAGGAGGAGGCCTCTGAGTTACGGAAACTAACCAATACTCAGAAAATTGAAAATAATGAACTGAAGGCTAGGTGGGAAGATGAGAAGGCACAACTAGAGAAGTCTAGGAATGATGCTGAAAAGAAATACAATGAAATCAATGAACAGAATAAAATATTACATAGCCAACTTGAGGCTTTTCATATTCAATGGGCTGAGAAGGAGCGAAATGCTGCTGGTATTTCATCTGGAAGTAGTAGTGCAGATGCCTTTGGTGATGCTGGCCTTCAAAATGCAGAAACAGAAGTTTCGTTGTTAAAACAAGAGAAGCTGCGGTTACAGTCACAGCTTGAGAGTGCTTTGAAGGAAGCAGAGTCTGCACATGCATCTCTAGAATCTGAGCGTGCAAAATCTAGATCATTTTTGTTTACTGAAGAAGAGTTCAAATCGTTGCAGCTTCAGGTCAGAGAAATGAATTTACTTCGTGAGAGTAACATGCAGCTCAGGGAAGAAAATAAACACAATTTTGAGGAGTGTCAGAAATTGCGTGAACTAGCACAAAAGGCTAGAGCCGAGGCAGATAACCTTGAGAAGGTCCTGAGGGAAAGAGAAATTGAGCTTGAAGGCCATAAGAAAGAAATTGAAACGCTAAAAATGGAAAAAGATAATCTCAACAACAAGGTTTTGGAGTTGCTTGAAAGGAGTAAAAATGTTGATGTTGAGGATTATGATCGAGTGAAGAAACTTGCTAGAGAAATTCAGGATAAACTAAGAGATAGGGATGCTCGGATTGATGAAATGAGTAAAAGTCTATCAGAGAAGCAGGATTCTGTTTCCCGTCTAGAGAAAGATCTTGCAAACTGTCGATTGGAGCTTGTAGAGAGAGAAAAGAGAATTAATGACATTCTGCATAATGAGGTCATTGAGATATTCTCTATGAAACTGCTGACTCAGTTTAAGAAGAGAATTGATGTTTTGTTAAGGGAAAAGGAAGACATCAGTAAAGAGAACCAGCAACTTTCTAGGCAATTAGACGAAATTAAACAAGGGAAAAGGTCAACATGTGATACAACTGGTGAGCAAGCGATGAAGGAAGAAAAGGACACAAGAATACAGATTTTGGAAAAACATCTAGAGAGACTTAGAGATGAATTAAAGAAGGAGAAGGAAGAATGTCGCCTAGAGAGAGGTAGACGATTGAAGACTGAAAAGGCTATAAAGGACTCTTACAACAACGTTGAGCAGGAGAAAATAAAATTTGTTAATGAAATTGAGAAGCATAAGGAGTCTCTGAAAAAGTTATCTGATGAGGTAGAAAAGCTTAAGATTGTTATTGGCAATCTTCCTGAGGGTTCAAATGTGGTTCAACTTCTTTCTGGATCCAATGTTGATGACTTTGCTGCTTCTTACATATCTGCCGTGGAAAATTTTGAAAAGGAAGCTCATTCAATATTTCGTGAGCTTGGAGGTCGTGGCAATCTTGGAGATGCAGCTACAATTACAGATGGTTCAACAGCTGCTACAGGTTCTCTTGGCCAAGTTCAATCCCAAAGCATCACACCTCTGGCTGCACCTGGAGCTAGCAGTTTACCACCTAAAGCGACTGGAGAAAGTGAGAAAAGACTGGCAGTACCTGTACCCAAAGCTAGTGTTGAAACACGTCGAACAGGTAGAAAATTGGTCAGGCCTAGACTCGTAAGACCTGATGAGCCTCAAGGTGACACAGAAATGTCTGATGCTGAAGGACCAGGGGGCAAGCCTGGGCCTTCTAGTGACACAGAGACAAGTAATTTTGCCCAATCATCTCAACCATTGGCTCGTAAGCGTGTTGCTCCGACCTCCACTTCAGAATTACGTGAAGAATCAGTTGCACCTGGTGAGAAGAGCTCTGATGTAGTAGCACCTGTGTTGAAGAAGTCAAAAGGATCGGAGTCCCCAGAAGAGAGTACAGAAGAACAACCTGCTGCAACTCTGGAATTTCCTGGCAGTCACCCAGCAACTGAAGAATTATTTGATAGCAGTGAGTTGCCACAAGGCCAAAATGAGGAAGGTGAAGCCCAAAATGAAGATGGTGAAATTACTGTTGGGAATGACGAGGAAGCAAAAGATCCACAACACTTGGATGGTACGAGTGAAGAGGAATTACAAGGTGACAAAGCTGGAATTTTAGAAGAGAATCCGGATCAACCTGATGAGATGCAGAGGGATCATACTGACCCAGACAACCAACAGTCAACATTGGCACCCAGTAATGAGAGAGAAGAGGGAGAATTGTTGCCAGATACTGGAGATCTTGAGGGTGGTAGTGACTTGTCTAACGTTGTGGAAAATCAAGAATCTCGGGAAGGTCCATCTGAGTCTGCCGCAACCCCTGAACGTTCCCCGGCCAGGGGGGATTATGATGCTCTAGAGGCTGGCGAGATTAATTCTCCCGAGCTTTCAAGTGATGATAAGAATGATGAGATTGACTTGGTGGAGGAGGCTGCTGATGGTTCCGACAAGTTACTTGATGTTAATGAGCCAATATCAGTGGAGAGTGATCAGGTAGCTGACCCTACACCAGTTGTGAGTGATGGTGGTGCTACTTTGACAAGTAGTGTTACAGAAAGTAGCTCGTCTAAGGTGAACTTACCTGTTCCAAGGCAAGGGACCCCCAGTGTCCCATCTGAAACAGAAGAGACCGTAAAGCAGGCATCACCTATTGGTAGTACTTCAACTACCATAAATTTGTCAGAGCGAGCACGGGAAAGGGCTCAAATGAGACAGGCTGGGTTGGTTTCTACCCCTACCGTTACTAGAGGTCGTGGAAGAAGTGCTCCCCGAGGTCGGGCTCGCGGACGGGCAGTAGTACGCCGGCCACCTCCATCTTCTGGTGGTGACCCATGA 4269 0.4268 MWDRKADFRKIGFANSLAEVGRNNLKTSIESSQEAAKKSLEKATERVRCLEDDLAKSRSEIIVLRSERDKMALEANFARERLDSFMKELEHQACPSEAKGVLQRNVEFSQLVVEYQRKLRESSESLIAAEELSRKLTMELSVLKQEKEVISNAEKRASNEVCSLSERVQRLQASLGTIQSTEEVREEARAAERAKQEEYIRKLEREWAEAKQDLNEERENVRRFTLDRDQTIKNSLRQVEDMSKELANALHAVASAESRAAVAEAKLSSLHRKLGSSDDKLVEMGGESGPSTLSSDKVVVSELQKAKEEIEKFKEEAHANKVHMLQYKSIAEVNEDALKQIEMAHEKFKTEAEETKKVLESELHSLREKMLEIENESSLKYKEVASETVGKEEALTSAMAEITNLKEEILTKSSQISALEIQLSGLKENLDREHQKWRAAQTNYERQVVLQSETIQELTKTSEALALLQEEASELRKLTNTQKIENNELKARWEDEKAQLEKSRNDAEKKYNEINEQNKILHSQLEAFHIQWAEKERNAAGISSGSSSADAFGDAGLQNAETEVSLLKQEKLRLQSQLESALKEAESAHASLESERAKSRSFLFTEEEFKSLQLQVREMNLLRESNMQLREENKHNFEECQKLRELAQKARAEADNLEKVLREREIELEGHKKEIETLKMEKDNLNNKVLELLERSKNVDVEDYDRVKKLAREIQDKLRDRDARIDEMSKSLSEKQDSVSRLEKDLANCRLELVEREKRINDILHNEVIEIFSMKLLTQFKKRIDVLLREKEDISKENQQLSRQLDEIKQGKRSTCDTTGEQAMKEEKDTRIQILEKHLERLRDELKKEKEECRLERGRRLKTEKAIKDSYNNVEQEKIKFVNEIEKHKESLKKLSDEVEKLKIVIGNLPEGSNVVQLLSGSNVDDFAASYISAVENFEKEAHSIFRELGGRGNLGDAATITDGSTAATGSLGQVQSQSITPLAAPGASSLPPKATGESEKRLAVPVPKASVETRRTGRKLVRPRLVRPDEPQGDTEMSDAEGPGGKPGPSSDTETSNFAQSSQPLARKRVAPTSTSELREESVAPGEKSSDVVAPVLKKSKGSESPEESTEEQPAATLEFPGSHPATEELFDSSELPQGQNEEGEAQNEDGEITVGNDEEAKDPQHLDGTSEEELQGDKAGILEENPDQPDEMQRDHTDPDNQQSTLAPSNEREEGELLPDTGDLEGGSDLSNVVENQESREGPSESAATPERSPARGDYDALEAGEINSPELSSDDKNDEIDLVEEAADGSDKLLDVNEPISVESDQVADPTPVVSDGGATLTSSVTESSSSKVNLPVPRQGTPSVPSETEETVKQASPIGSTSTTINLSERARERAQMRQAGLVSTPTVTRGRGRSAPRGRARGRAVVRRPPPSSGGDP 1422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01741 1422 Coils Coil 112 146 - -
Spst5g01741 1422 Coils Coil 232 273 - -
Spst5g01741 1422 MobiDBLite consensus disorder prediction 1319 1374 - -
Spst5g01741 1422 Coils Coil 458 524 - -
Spst5g01741 1422 Coils Coil 178 220 - -
Spst5g01741 1422 MobiDBLite consensus disorder prediction 1156 1200 - -
Spst5g01741 1422 Coils Coil 612 632 - -
Spst5g01741 1422 MobiDBLite consensus disorder prediction 1232 1248 - -
Spst5g01741 1422 Coils Coil 871 905 - -
Spst5g01741 1422 Pfam TPR/MLP1/MLP2-like protein 401 527 IPR012929 GO:0006606
Spst5g01741 1422 Coils Coil 402 447 - -
Spst5g01741 1422 MobiDBLite consensus disorder prediction 1013 1035 - -
Spst5g01741 1422 PANTHER NUCLEOPROTEIN TPR-RELATED 19 1407 - -
Spst5g01741 1422 Coils Coil 640 695 - -
Spst5g01741 1422 MobiDBLite consensus disorder prediction 972 1422 - -
Spst5g01741 1422 Coils Coil 557 598 - -
Spst5g01741 1422 Coils Coil 825 859 - -
Spst5g01741 1422 Coils Coil 33 60 - -
Spst5g01741 1422 MobiDBLite consensus disorder prediction 1050 1081 - -
Spst5g01741 1422 Coils Coil 777 811 - -
Spst5g01741 1422 Coils Coil 338 376 - -
Spst5g01741 1422 Coils Coil 725 759 - -
Spst5g01741 1422 Coils Coil 296 323 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01741 K09291 - gmx:100811882 2077.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01741 5 53080370 53097843 Spst5g01741 5 53080370 53097843 ECH