Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01712 ATGATAAACTTTCAAGGATCTTCAAACACCATCTCAAACTTGTTCTTTGTTTGTGTCCTTCTTTTGCCAACCCTGGCCTTAGGGGATTGCACATGTGACATAGATGAGGCCAAAAAGAGTAACTCAAGTGAAGTGCTCCACTACAAACTTGGCTCAATTGCTTCTGTGCTTGTTGCTGGGGCTCTTGGAGTGAGTCTCCCATTGCTGAGCAAGAGAATCCCTACTCTTAATCCCAAGAATGACATATTCTTCATGGTTAAGGCCTTTGCTGCAGGGGTGATTCTTGCAACTGGGTTTGTCCACATACTTCCTGATGCATATAAAAGCTTGACTTCACCTTGCCTTAAGGAAAATCCATGGGGCAAGTTTCCCTTCACTGGATTTGTTGCCATGATGTCCTCAATAGGGACCTTAATGGTGGACTCATTTGCCACAGGGTTCTACCATAGGCAACATTTTAATCCCTCAAAGCAGGTTCCTGCTGTTGATGAGGAAATGGGAGATGAACATGCTGGTCACATCCATGTTCACACTCATGCCACACATGGCCATGCTCATGGATCAGCTGTGTCATCTGAGGACTCAGAAACATCTGAAGTAATTAGACAGCGCATCATATCACAAGTATTGGAAATAGGAATTGTGGTCCATTCAGTGATTATTGGAATATCATTGGGAACTGCTGGAAGCATTGATACCATTAAGCCACTCCTGGTGGCTCTCTCTTTCCATCAATTTTTTGAGGGGATGGGTCTTGGTGGTTGCATATCTCAGGCAAAGTTTGAGTCCAAGTCTACAGCAATTATGGCAACTTTTTTCTCCCTAACAACCCCAATTGGTATAGCAATTGGGATGGGAGTGTCAAGTGTTTACAAAGAGAATAGTCCTACTGCTTTAACTGTTGAAGGGATTTTCAATTCTGCTTCTGCTGGGATTTTGATTTACATGGCACTGGTTGATCTTCTAGCAGCAGATTTTATGAACCCAAGATTGCAGAAAAATTTGAAGCTCCAACTAGGGGCACATGTATCCCTTCTTTTAGGTTCAGGTTGCATGTCTCTATTGGCCAAATGGGCTTAG 1080 0.4324 MINFQGSSNTISNLFFVCVLLLPTLALGDCTCDIDEAKKSNSSEVLHYKLGSIASVLVAGALGVSLPLLSKRIPTLNPKNDIFFMVKAFAAGVILATGFVHILPDAYKSLTSPCLKENPWGKFPFTGFVAMMSSIGTLMVDSFATGFYHRQHFNPSKQVPAVDEEMGDEHAGHIHVHTHATHGHAHGSAVSSEDSETSEVIRQRIISQVLEIGIVVHSVIIGISLGTAGSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESKSTAIMATFFSLTTPIGIAIGMGVSSVYKENSPTALTVEGIFNSASAGILIYMALVDLLAADFMNPRLQKNLKLQLGAHVSLLLGSGCMSLLAKWA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01712 359 NCBIfam ZIP zinc/iron transport family 32 359 IPR004698 GO:0005385|GO:0016020|GO:0071577
Spst5g01712 359 Pfam ZIP Zinc transporter 47 356 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Spst5g01712 359 PANTHER ZINC/IRON TRANSPORTER 45 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01712 Spst-Chr5 52391063 52393443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01712 12 359 Inorganic Solute Cotransporters AT3G12750 63.305 9.96e-158 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01712 K14709 - gmx:100805124 616.305