Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01697 ATGGCGACGCCGAACAGAATCGAACGCGCTCACCAGATGTACCGTGATGGACGATACGAGGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATGGCCAAGACCAACCCTCAGAAGATCGCTTTGCATAGCAATCGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACCTCGGTGCTTGAGCTTGATCACAAGCACAGTGGGGCCTTGATGTTAAGGGCTCAAACACTAGTCACCCTGAAGGAGTACCATTCAGCTCTCTTTGACGTCAACAGACTGTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCATGCTCGCTTGAAGACACAGTTGTCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAGGAAGATGAGGAGCCTGAAGTGATACAAGAAGGGGAGAATGTAAAAGAAGAGATGGGAGAGAAATACTCTTTGATTTCTAATATTAGGACAGAACAGAAGGATGAACTTGGCAAAGGTACTGAAGGCGCTCCTCATGAAGCAGACCCCAAGTTTTCAACGAAGCAAGGGAGAAACCAAAACCATGAGTCTAAGAAGTCCACAACAGATGCTATAGCTCTTAAAGCACCAAACAGGGAATCAAGTGAGCAACATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTATGCACGGTGGGATAGTGTTGAAGATGATTCTAGTGATGATGACGACGATGATGAAGAAGAAGAATCTTTGCCTCAATACCGGTTTCGTGTAAGAACAGTTGGTGTCCGTCCTGTAAAGTGA 834 0.4556 MATPNRIERAHQMYRDGRYEEALGFYTEAIAMAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARLKTQLSLAPIPESEEEFEEQEDEEPEVIQEGENVKEEMGEKYSLISNIRTEQKDELGKGTEGAPHEADPKFSTKQGRNQNHESKKSTTDAIALKAPNRESSEQHSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDDDEEEESLPQYRFRVRTVGVRPVK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01697 277 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 277 - -
Spst5g01697 277 SUPERFAMILY TPR-like 7 120 IPR011990 GO:0005515
Spst5g01697 277 MobiDBLite consensus disorder prediction 244 259 - -
Spst5g01697 277 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
Spst5g01697 277 MobiDBLite consensus disorder prediction 170 264 - -
Spst5g01697 277 MobiDBLite consensus disorder prediction 127 155 - -
Spst5g01697 277 Gene3D Tetratricopeptide repeat domain 5 152 IPR011990 GO:0005515
Spst5g01697 277 SMART tpr_5 74 107 IPR019734 GO:0005515
Spst5g01697 277 SMART tpr_5 3 36 IPR019734 GO:0005515
Spst5g01697 277 SMART tpr_5 40 73 IPR019734 GO:0005515
Spst5g01697 277 MobiDBLite consensus disorder prediction 128 146 - -
Spst5g01697 277 MobiDBLite consensus disorder prediction 170 204 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01697 2 121 Calmodulin-binding Proteins AT3G25230 31.061 1.61e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01697 - - gmx:100792046 455.292