Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01687 ATGCGAAGCTGCATCAACCTCTGGATCGTGCTTGCACTCGTCGTCCCTGTGCTCCTCTCTCTCAGAAGCCCTCGAGGCGAAACCCAAACCAAACCTTCTTCTTCTTCTTTCTCTGATTCTTCTTCCTTCTCCGTGAAGCTTGCCAACACATTCCACTTCAACCAAAGGATCCGAGACGGGTCCAATCTCGAATACGATTTCTACAGGGACACGTGTCCCCAAGCCGAGGGCATTGTCCGTTCAGCGCTCACGCGCATCTACTTCGACCACAGGGACGTTGCACCTGCTCTGCTTCGTCTCTTCTTCCACGATTGCTTCATACAGGGGTGTGATGCTTCGTTGCTGTTGGATGAGAACGATGGTGATAGTAACCGTTCCGTGGAGAAGCAGGCTGTGCCAAACCAGACATTGAGAGGTTTTGACAAAATTGATTTGATAAAGGAGGAGGTGGAGCAAGCATGTCCTGGTGTTGTGTCTTGTGCTGATATAGTTTCTCTTGCGGCCAGGGATTCTGTTCTTCTGGCTGGTGGACCTTTCTATCCTGTTTTAACCGGCAGAAGGGACAGCCATCAATCGTTTTACGAAGAAGCAACTGCGCAGATTCCCAGACCTGATGATAATGTTACACGCACACTGCATCTCTTTAATCTCAGAGGGTTTAATGCAAGAGAAACTGTCAGCCTTCTTGGAGGACACAACATTGGCAAAATTGGTTGTGATTTCATTCATCAAAGGCTGTACAACTTTCAAGGCACAGGACAGCCAGACCCCAGCATACCTCTTGATTTCCTTCGTCAGATGAGACTAAACTGCCCAGACAGCACGAACACCAGCAGCAATGAAGATGAGTTTGTGACTTCAAAGCCCATGAGCAGTGATGTTCACTCTAGACTGGGGATGTCATATATGCAAGCACTGTCATCTTCAGTGTCATCAGGTTCAGCATTTGACACTCACTACTACCAGAGCCTGCTAAGAGGAAGAGGACTACTTTTTGCTGATCAGCAACTGATGGCTGAGGAGAAAACTGCCAGATTGGTCTCTGCTTATGCTTCAGATGATGGATCAACCTTTCGCATGGACTTTGCCAGGGTCATGTTGAAAATGTCTAATCTTGATGTTTTGACAGGACTTCAAGGTCAGGTTCGACTCAATTGCTCCCAACCTGTGACTTCTTGA 1179 0.4784 MRSCINLWIVLALVVPVLLSLRSPRGETQTKPSSSSFSDSSSFSVKLANTFHFNQRIRDGSNLEYDFYRDTCPQAEGIVRSALTRIYFDHRDVAPALLRLFFHDCFIQGCDASLLLDENDGDSNRSVEKQAVPNQTLRGFDKIDLIKEEVEQACPGVVSCADIVSLAARDSVLLAGGPFYPVLTGRRDSHQSFYEEATAQIPRPDDNVTRTLHLFNLRGFNARETVSLLGGHNIGKIGCDFIHQRLYNFQGTGQPDPSIPLDFLRQMRLNCPDSTNTSSNEDEFVTSKPMSSDVHSRLGMSYMQALSSSVSSGSAFDTHYYQSLLRGRGLLFADQQLMAEEKTARLVSAYASDDGSTFRMDFARVMLKMSNLDVLTGLQGQVRLNCSQPVTS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01687 392 PANTHER PEROXIDASE 25-RELATED 38 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 ProSitePatterns Peroxidases active site signature. 94 105 IPR019794 GO:0004601
Spst5g01687 392 Pfam Peroxidase 79 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 ProSiteProfiles Plant heme peroxidase family profile. 62 390 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 FunFam Peroxidase 66 211 - -
Spst5g01687 392 Gene3D Peroxidase, domain 2 202 369 - -
Spst5g01687 392 Gene3D - 66 387 - -
Spst5g01687 392 CDD secretory_peroxidase 62 387 IPR033905 GO:0004601|GO:0042744
Spst5g01687 392 PRINTS Plant peroxidase signature 96 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 72 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 138 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 364 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 176 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 307 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 223 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 323 340 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Plant peroxidase signature 157 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 SUPERFAMILY Heme-dependent peroxidases 63 388 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Haem peroxidase superfamily signature 224 239 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Haem peroxidase superfamily signature 176 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Haem peroxidase superfamily signature 309 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Haem peroxidase superfamily signature 94 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 PRINTS Haem peroxidase superfamily signature 158 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst5g01687 392 FunFam Peroxidase 202 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01687 Spst-Chr5 51930549 51933297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01687 3 388 Peroxidase AT4G33870 44.444 3.82e-103 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01687 K00430 - gmx:100804973 684.1