Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01682 ATGTCTACAATGATGTTTCATGTGGATGATGCTAAACTGACCATGATGTTTATTTTCTCATGGTTGTGTCTGCATAGTTCTTATGCGTTGGTGAGTGACAGTTTAAGGCCAGGGGGTACATTTGATCACTCAACTACGCTATGTTCACCAATGAATAAGTTTTGTTTGAAATTTGGACCTCTTCAGTTTGACCCCACTCACACCTACTTACTCATTCGCAACACACGCACTCCAACCGGATATGCTGTTTGGATTGCCAACAGAAATGACCCTATTTACAACAATTCTGGGGTGCTTCTAACATTGAATCATTCAGGTGCTTTAAGTATCACTAGTCAAGGTAGGAACCCCATAATACTCTACTCACCTGTTCTACCAACCACAAAAAATGTTGCTGTCACCCTTCTGGATTCTGGGAACTTAATCCTTGGAGAATATGATGCTAGTGGATCTATGAAAAAAGTGATGTGGCAAAGCTTTGATCATCCTTCAGATGTGTTGCTACCTGGTATGAAGTTAGGGGTTAATCACAAGACTAATCAGTCATGGTTGGTTGTGTCATCATTTTCTACTATCAACCCATCTTCAGGTTTCTTTGCACTTGAGTGGGAGCCGAGGAAAGGAGAATTGGTGATTAAGAGGGAAGAGATTATATATTGGACAAGTGGAGTCCTGAGAAACAATAAATTCGACAATGTTCCAAGGCATATGCAGCTTATGTATGAGTACAACACCGTCTCAAACAAGGATGAAGAGTCCTTTAGTTATGTAAGTCATAATGATCACTCGCAGTGGGTGTTGTTTAGTAATGGAAACTTGCAGGATACAGAAAATGGAGATATTGCTCAAGCTCAAAACTGTAATGGCTATAAAACCAAGGAAGGTTGTGAGATATGGGAGGACCAACCCGTGTGTAGGCATTCTGATGATACATTTGAAGTTCAATCAGGATACTTTGATCATCCAACGCCTCAAAATAATGATTCTTATGCAGATGATAAGAACATTACACTAACTGAAACTGATTGCAAGAATTTTTGTTGGAGAAATTGCAACTGTGTTGGGTTCGCAACTTATTTTCCCAACCAAACAGGGTGTAAATACTATTATGGAGGATGGGTGCCTACATATGTGAAGTCTGCAGGATTGAGTGTCAACATTCTTGTGAAGACCAACCGACATCACAAAGATATGAAGAAGTGGTTTAAAATTGGTGTTCCGGTTGGAACAACTTTACTCATAATTAGCCTTGGCATTTTCTGTCTGTGGATGAGGAGAAGAAAAGCTTCACATCAAGGTACTTATTTCTCAATTTTTATAGATCAGTACCATCACCCAGTTGCGTTTCAAGCACTACTTTTCCTCCATCATAACAGTAACAACGTTTTGGTACAACTTGCCTTAATAGAGAAGAGAAGCAAAATGGGGAGCGGCATTTTTAATTTCGTGGTGTCTGAGAGATGTAATAGTTTAGATGAACATCAAAATGAATTGAAAAGTGGGAATTCCTTAAGAATTTTCAGTTATGCATCAATCATGGTGGCTACTAAAAGGTTCTCAATGGAAAACAAGTTAGGAGAAGGGGGCTTTGGACTTGTGTATAAGGGACTATTACCCCAGGGAGAAGAAATAGCAATAAAAAGACTTTCGAAAGGTTCAGGGCAAGGAGACACTGAGTTTAAAAATGAATTAACTCTCATATCTGAACTCCAACACATGAATCTTGTTCAGTTGTTGGGTTGCTGCATTCATGAAGATGAAAGAATGCTAATCTACGAGTATATGCCTAACAAAAGCTTAGACTACTTTTTATTTGACATTATGTCATATGTTATACTATGCAGCGGTTACATGTCACCTGAGTATGCCATGGAGGGAATTTTCTCTTTCAAATCTGATGTCTATGCTTTTGGAGTCTTGCTGCTTGAAATTATCAGTGGCAGAAGAAACAATGCTACTGATTGGCCACTCAATCTAGTTGGACATGCTTGGGAGCTATGGAAACAAGGCAAGGCACATGCACTAGACCTCTTAGATCCAACTTTAAGAGAACCATTCACTCAAGAGGAAGCATTAAGATGCATTCATGTTGGTCTTCTATGCGTAGAAGAATGTGCATCTGATCGTCCCAACATTTCAGAGATAATCCCCATGTTAACCAGTGAAATTGCAACATTTCCATTGCCTAGAAAACCAGCATTTTATCGAGGAAGAAAATTGGTTGAGGAAGACAGTTCTTCAATTGATAATGAAACTCATTCAGTAAATGGTTTAACTATTTCTAACATAGGTGAAAGATAA 2301 0.3885 MSTMMFHVDDAKLTMMFIFSWLCLHSSYALVSDSLRPGGTFDHSTTLCSPMNKFCLKFGPLQFDPTHTYLLIRNTRTPTGYAVWIANRNDPIYNNSGVLLTLNHSGALSITSQGRNPIILYSPVLPTTKNVAVTLLDSGNLILGEYDASGSMKKVMWQSFDHPSDVLLPGMKLGVNHKTNQSWLVVSSFSTINPSSGFFALEWEPRKGELVIKREEIIYWTSGVLRNNKFDNVPRHMQLMYEYNTVSNKDEESFSYVSHNDHSQWVLFSNGNLQDTENGDIAQAQNCNGYKTKEGCEIWEDQPVCRHSDDTFEVQSGYFDHPTPQNNDSYADDKNITLTETDCKNFCWRNCNCVGFATYFPNQTGCKYYYGGWVPTYVKSAGLSVNILVKTNRHHKDMKKWFKIGVPVGTTLLIISLGIFCLWMRRRKASHQGTYFSIFIDQYHHPVAFQALLFLHHNSNNVLVQLALIEKRSKMGSGIFNFVVSERCNSLDEHQNELKSGNSLRIFSYASIMVATKRFSMENKLGEGGFGLVYKGLLPQGEEIAIKRLSKGSGQGDTEFKNELTLISELQHMNLVQLLGCCIHEDERMLIYEYMPNKSLDYFLFDIMSYVILCSGYMSPEYAMEGIFSFKSDVYAFGVLLLEIISGRRNNATDWPLNLVGHAWELWKQGKAHALDLLDPTLREPFTQEEALRCIHVGLLCVEECASDRPNISEIIPMLTSEIATFPLPRKPAFYRGRKLVEEDSSSIDNETHSVNGLTISNIGER 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01682 766 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 710 - -
Spst5g01682 766 ProSiteProfiles Protein kinase domain profile. 519 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01682 766 ProSiteProfiles Bulb-type lectin domain profile. 32 156 IPR001480 -
Spst5g01682 766 Pfam D-mannose binding lectin 83 187 IPR001480 -
Spst5g01682 766 Gene3D - 27 160 IPR036426 -
Spst5g01682 766 SUPERFAMILY Protein kinase-like (PK-like) 503 739 IPR011009 -
Spst5g01682 766 Gene3D Transferase(Phosphotransferase) domain 1 595 731 - -
Spst5g01682 766 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 594 - -
Spst5g01682 766 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Spst5g01682 766 Pfam Domain of unknown function (DUF3403) 721 763 IPR021820 GO:0004674
Spst5g01682 766 Gene3D Phosphorylase Kinase; domain 1 481 594 - -
Spst5g01682 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 185 IPR036426 -
Spst5g01682 766 SMART blect_4 38 163 IPR001480 -
Spst5g01682 766 PIRSF SRK 3 300 IPR024171 GO:0004674
Spst5g01682 766 PIRSF SRK 606 766 IPR024171 GO:0004674
Spst5g01682 766 PIRSF SRK 277 614 IPR024171 GO:0004674
Spst5g01682 766 Pfam Protein tyrosine and serine/threonine kinase 520 604 IPR001245 GO:0004672|GO:0006468
Spst5g01682 766 Pfam Protein tyrosine and serine/threonine kinase 614 717 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01682 Spst-Chr5 51861139 51864776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01682 493 757 Receptor kinase-like Gene Family AT4G11530 38.824 2.21e-61 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01682 PK_Tyr_Ser-Thr 2.8e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01682 - - qsa:O6P43_029364 558.14