Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01675 ATGCATATCAATGCACGACCTCTGGCATATAATATGTCTGAAAATAAACCTGTACTTAATTATTCCATACAGACAGGTGAGGAATTTGCTCTCGAGTTCATGAGAGATAAGGTGAATCTCAGGAAGCCTTCCTTTCCAAATGTTGTGGGTGATCCCAACTATTCAGCAGGATATATGGAATTGAAAGGCATTTTGGGACATACAGGATCCGAGAGTGGATCTGATATATCTGTGCTCACAAAGGCGGAAAAGGGTCTAAAAGAGTTTGACAGAAGGAACTCTTCTCAACACCAGGACAGAAGTAATTATGGTTCAGCTCGATCAATTCCTAGAACTTCATCTAATCAAGACAGTTACCTAGTCCTGCATGGTACTGCCTCTTCCAGTGCTTCTCAAAACACATCAATGAAGATGAAGATTCTATGCAGCTTTGGGGGTAGAATATTGCCAAGGCCTAGCGATGGCAAGCTTAGATATGTTGGGGGTGAAACCCGTATTATTAGTATAAGAAGGGACATACGTTTTCAGGAGCTTGTGCAGAAAACATCATTAATTTATAGTGAAGCTCATGTGATAAAGTATCAGCTCCCTGGAGAAGATCTTGATGCGTTAGTTTCAGTATCTTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATTTACAAGGCGGAAGAGGATTAACAAAGCTTAGGATGTTTCTGTTCTCTATAAATGATTTAGATGAATTTGGCATAGCTAGCATTGATGGTGATTCTGAAATACAGTATGTAGTTGCTGTTAATGGCATGGACATCGGTTCAAGAAACAACTCATTCCTTCATGCTGCAAGCGGCTCTACTAATAACTTGCATGAATTGAATGAACAAAATAATGAGAGGGAGACCAACAGAGTTTTGATGGACTCATTTGGTGTTAGCAGTTCATCCTTGACTGACAACGTTAAATCATCATTGACTATTCAATCATCACAACCAATGCTTCCAATCTCCTCTAATGCTCATGAAACCCATCCATTGTTTTATGATGACCAGGTTATTCACCTTGGGGAACCTAGTCAATATCCACTACAGCAAGGGCTGGTTCCTTCTAATAACTCCGCTCGCAATCTTGGAGAGATTCCAGCTTCTGTGCCTATTCATAGTCTTGTTAACCAAGGGATCATGAATGATGGACAAGCATCGAGCGAGTTGCAGGTACAAATTTCAGCTGTCCCAGACATGCTGGTAAAAAGAAAGGATGATAATTTCATTCATACAGGCAGTGAACCAGGAAAGGTTTTCCCCTCGGAAGCACACTATCCTATTGCTTCCCTGCCAATTGAGGAAAATTTGCATGCTATTTTACCAGAGGCACCTGTTACAGCTGCTATATCAGAAGGTCTTCATCCTGTACTGCCATCAAAGAGCAAGGGTAAGCACCAGCAGTCCGAAGATGCTTATTCATTAATCGGTAGAACGAATCCCACACAGACTCCTAAGTCTGGTGAAGATGACTTCTATACTACCACTAATGCATTCATCTGTCCTCCAGTTGATGCTGAGTCCAATGTGATTGATTTCAGTTGCCTAGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGCAGATTTGCTGAATCGATCTACAAAGTCAGATGATGCACATGGTTCTCACTTACTCATGTCAGATTTGCTTTCCGACTTCAACCAGAATAATTCAGTAACAGAATCCAGTGACATATTGCTCAATGAGAATATGTCAAATCCGAACATTATGTCCAGCTCAGCAGCAAAGCCTTTGCAAGCAGATGGTAATACCATTGATGATGGATTTGACCTGCCACCGACATACAAACAGTTGCCTGATACAACAAATAAGTTGAAGTCAAAGTTATCACCACTTGTGACTTCTGAGTTGAGGCAAGGGTTAGCAGATAATAAGGTTTCCAGAAATGAGGACCAGGTACTTAGTTCAGAAAACGATATCAATCGATCCAAAGATGATCATATCATTTTCTTAGTTGATGAAACCAAAGGTACTGGACCTCTGGCATTTCATCAGGTTCCTCCTATTGAACATTATCTGAATCCATCATCTAAACATCAAGACCTCAATTTGGTTGAGGCTTCTTCTAGGAGGGAAGCTGATAACGGTAATAAGGTCCACGCTCTGCCTTTTCCTTTAACTGGAAACACAGGCCAAGATGTTTCTCAAAATTTTCCCCAAGAAGCTAAATCAAGACCTACTCAGGGCGACATTCTTATTGATATTGAGGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAAGCAATACATTCTGAAGATTCCTCAAGTATTAGTCCGTTACCAACAGATAGAGCAGTGAGGAAAGTTCAAGACGGAGATAGTAAATCTCAGCAATTTGCTGCTCTACCTGCAGATGGTGCTTTGGCAGGACACAAGGAATACCACCTAAATTTTGGTGGTGATGAAAATCAGAAAAATGTACCTATAACCACTAAAACAGAAACAACTCCGGTTCAACAGAAATATGAGCATTCCCAACTAAAGGGCAGTGAAAATAAGAACATGGAAGCCATAATGGAAAATATAAGACCGCATGAATCTGAATACCAGGAGGATGACAAGAATAAAACAAGGAATGTGGCTGTAGGGAACTTTGACACCAGTACTGTGCAGTTCATAAAGAATGATGATCTTGAAGAGCTGCGTGAGCTGGGTTCTGGTACCTTTGGGACTGTATACCATGGAAAATGGAGGGGATCGGATGTTGCTATTAAAAGAATAAAGAAAAGCTGTTTTGCTGGCAGATCTTCAGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCGACTGTTACTGAGTACATGGTGGATGGTTCTCTCAGGAATGTTTTGCTTCGTAAGGATAGATATCTTGATCGCCGAAAGAGGCTGATAATAGCCATGGATGCAGCATTTGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGATTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGGCCAATATGCAAGGTTGGCGATTTTGGCCTATCAAAGATTAAGCGAAACACCCTGGTGTCTGGTGGTGTTCGTGGAACTCTACCTTGGATGGCACCAGAGCTGCTAAATGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTCTTATGGGAGATTCTTACTGGTGAAGAGCCATATGCTAATATGCACTATGGTGCAATTATAGGGGGTATTGTGAATAACACATTAAGACCCACAATCCCTAGTTATTGTGATCTTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAATCCTACAGTCAGACCATCCTTCACAGAAATTGCTCGCCGCCTGCGTGTTATGTCTGCAGCTGCTGTTCAGACCAAAGGACAGGGCCACAAGGCATCTAAATGA 3567 0.416 MHINARPLAYNMSENKPVLNYSIQTGEEFALEFMRDKVNLRKPSFPNVVGDPNYSAGYMELKGILGHTGSESGSDISVLTKAEKGLKEFDRRNSSQHQDRSNYGSARSIPRTSSNQDSYLVLHGTASSSASQNTSMKMKILCSFGGRILPRPSDGKLRYVGGETRIISIRRDIRFQELVQKTSLIYSEAHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGGRGLTKLRMFLFSINDLDEFGIASIDGDSEIQYVVAVNGMDIGSRNNSFLHAASGSTNNLHELNEQNNERETNRVLMDSFGVSSSSLTDNVKSSLTIQSSQPMLPISSNAHETHPLFYDDQVIHLGEPSQYPLQQGLVPSNNSARNLGEIPASVPIHSLVNQGIMNDGQASSELQVQISAVPDMLVKRKDDNFIHTGSEPGKVFPSEAHYPIASLPIEENLHAILPEAPVTAAISEGLHPVLPSKSKGKHQQSEDAYSLIGRTNPTQTPKSGEDDFYTTTNAFICPPVDAESNVIDFSCLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMSDLLSDFNQNNSVTESSDILLNENMSNPNIMSSSAAKPLQADGNTIDDGFDLPPTYKQLPDTTNKLKSKLSPLVTSELRQGLADNKVSRNEDQVLSSENDINRSKDDHIIFLVDETKGTGPLAFHQVPPIEHYLNPSSKHQDLNLVEASSRREADNGNKVHALPFPLTGNTGQDVSQNFPQEAKSRPTQGDILIDIEDRFPRDFLYDMFSKAIHSEDSSSISPLPTDRAVRKVQDGDSKSQQFAALPADGALAGHKEYHLNFGGDENQKNVPITTKTETTPVQQKYEHSQLKGSENKNMEAIMENIRPHESEYQEDDKNKTRNVAVGNFDTSTVQFIKNDDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRNVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWKTLMEQCWAPNPTVRPSFTEIARRLRVMSAAAVQTKGQGHKASK 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01675 1188 Gene3D - 156 239 - -
Spst5g01675 1188 MobiDBLite consensus disorder prediction 98 114 - -
Spst5g01675 1188 PRINTS Tyrosine kinase catalytic domain signature 1025 1043 IPR001245 GO:0004672|GO:0006468
Spst5g01675 1188 PRINTS Tyrosine kinase catalytic domain signature 988 1001 IPR001245 GO:0004672|GO:0006468
Spst5g01675 1188 PRINTS Tyrosine kinase catalytic domain signature 1096 1118 IPR001245 GO:0004672|GO:0006468
Spst5g01675 1188 PRINTS Tyrosine kinase catalytic domain signature 1140 1162 IPR001245 GO:0004672|GO:0006468
Spst5g01675 1188 MobiDBLite consensus disorder prediction 87 114 - -
Spst5g01675 1188 SUPERFAMILY Protein kinase-like (PK-like) 894 1168 IPR011009 -
Spst5g01675 1188 ProSitePatterns Protein kinases ATP-binding region signature. 912 937 IPR017441 GO:0005524
Spst5g01675 1188 Gene3D Transferase(Phosphotransferase) domain 1 993 1188 - -
Spst5g01675 1188 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 157 239 - -
Spst5g01675 1188 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1031 1043 IPR008271 GO:0004672|GO:0006468
Spst5g01675 1188 CDD STKc_MAP3K-like 912 1169 - -
Spst5g01675 1188 PANTHER SERINE-THREONINE PROTEIN KINASE 182 1170 - -
Spst5g01675 1188 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 994 1186 - -
Spst5g01675 1188 SMART serkin_6 906 1172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01675 1188 Pfam PB1 domain 154 237 IPR000270 GO:0005515
Spst5g01675 1188 CDD PB1_UP2 141 237 - -
Spst5g01675 1188 SMART PB1_new 152 239 IPR000270 GO:0005515
Spst5g01675 1188 ProSiteProfiles Protein kinase domain profile. 906 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01675 1188 MobiDBLite consensus disorder prediction 481 499 - -
Spst5g01675 1188 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 899 993 - -
Spst5g01675 1188 Pfam Protein tyrosine and serine/threonine kinase 907 1169 IPR001245 GO:0004672|GO:0006468
Spst5g01675 1188 SUPERFAMILY CAD & PB1 domains 153 241 - -
Spst5g01675 1188 MobiDBLite consensus disorder prediction 466 499 - -
Spst5g01675 1188 Gene3D Phosphorylase Kinase; domain 1 891 992 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01675 Spst-Chr5 51800990 51807605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01675 4 583 MAP Kinase Kinase Kinase AT1G16270 38.583 3.97e-92 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Spst5g01675 PK_Tyr_Ser-Thr 4.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01675 - - var:108333936 1982.22