Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01651 ATGCTACCAGCATCCACTGTCATGTCTCTTGCCGGCGCCGGCGCCGGCACCGTCGTGCCGAGGGGCTTCCTTTACAGCAACACACCATCAATGGTTTTAAATCGAAGCAGAGAAACTCACGTTCGAGCTTCGCATTCGGATGTAAATGAAGACACAGATGACATGTATGAAGATTTAATTAATAATTATGGAAAAGTGGTATTTAGTAGAAAAGACAAAAAGCCTGCTAGCGCAGAGATTGATGATGATGCTGAAAGCCTGTCATTTGCTGTGGAACTGGCTACGGTTGCAACTGAGGTTAAGGCAGCAGATATAAAGGTCTTGTTTGTGAAGCCACTTGTTTACTGGACCCGATTTTTTATCATAGCTACAGCATTTTCTCGTCCCCAGATCGATGCTATCAGGTCCAGAATGAGAGATAGAGCTGAGAAGAAATATGGAAAAATTCCAACAGGAGATACAAAGCCCAACTCATGGACCCTGTTGGACTTCGGCGATGTTGTTGTCCACATCTTCCTTCCCTCACAGAGAGCTTTCTACAATTTGGAAGAGTTTTATGGTAATGCAACACCAGTAGAGCTTCCTTTTGAAAATCAACCACCATTTCGTAGTTGA 615 0.4407 MLPASTVMSLAGAGAGTVVPRGFLYSNTPSMVLNRSRETHVRASHSDVNEDTDDMYEDLINNYGKVVFSRKDKKPASAEIDDDAESLSFAVELATVATEVKAADIKVLFVKPLVYWTRFFIIATAFSRPQIDAIRSRMRDRAEKKYGKIPTGDTKPNSWTLLDFGDVVVHIFLPSQRAFYNLEEFYGNATPVELPFENQPPFRS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01651 204 Pfam Ribosomal silencing factor during starvation 92 186 - -
Spst5g01651 204 PANTHER IOJAP SUPERFAMILY ORTHOLOG 46 201 IPR004394 -
Spst5g01651 204 Hamap Ribosomal silencing factor RsfS [rsfS]. 84 187 IPR004394 -
Spst5g01651 204 NCBIfam ribosome silencing factor 93 186 IPR004394 -
Spst5g01651 204 Gene3D Beta Polymerase, domain 2 85 195 IPR043519 -
Spst5g01651 204 SUPERFAMILY Nucleotidyltransferase 86 196 IPR043519 -
Spst5g01651 204 FunFam Protein Iojap, chloroplastic 85 190 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01651 - - gmx:100306104 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01651 5 51394887 51398801 Spst5g01651 5 51394887 51398801 ECH