Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01646 GGTAATGTAGGTGAGACTAAAGGTAGTGGTGATGGTACTGATGATATTGAAGGCAATGTAGCTCCTCGGGAAGGTGCTAATGCAATGACAGGTGATGGACTAGGGTTGGGTGCATCGACTTGGGACGGGGCAGAAGTGGCTGTAGGTGCAATATTGTTTGTATGGGCATGTATATTCTCAGCACCTGCAGATGAAGGTATAGGTGAAGAAACCATGAAATCTGGCAGAGACAAAGAGAAAGAGAATGATCGCTGCATCAGTTCGCATATGCAGACCCTCCATCGCCGTCTTCTCCACGCCCTAAACCTTGGCACCAGACATTTTGATGAGAAGACAAATAGATCGAGGTGGCAGTGCGCCAACATTGAAGTGCAGAAAAATGTACTACGATCAACTGGTGCGTTTCTTGATTCCTTATCGGGAGATGCACGTGCAGCACGTCATGCTGTTGTCAAGGAATCTGTTCCTGATATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCCTTATTAAGCATGGCATCAAAAGTTACGGTTAAGTTAGTTAGTGTTCTACCTATTCCATTATTGCAATCACAACATATGTTGGATCTTGTTTATTGTCTATCATCCTTGCTATCTTCACATCAAGTAGAAGTTGCTATACCCTGTGCTACCGCTTTGAAGTTGGTAATCTCAAATTTGAGTGCTACTAGTGAGAAGGAAGTTATGGAAGCATTGAAAGAAACAGAGGCTTCCATTCAAATTGTTGGAAACATAAAAGATTTTGCTGAAGGTGCAAAGAAAATTGAATATTTTGAAGAGATGACTTTACTTTTGAGCACTATACTGTGGCGCTGGCCTCCGTCTAGGTTTCCTATTTGTAATGACGTAATACTTATGAAAGTTTTAGCAAACATCCAATCAAGGACAAATAGTTCTATTAAACTTGCGCTTTTAAAGTTGTACACATCTTTAGCTTTATGTGATTCTGTAGCAAGAAAACTTATAGAGGATGGAGAAGTATTTCCACAAATGTTTGTGCAGGCAATGGGAAAATCAAACCCTCATGCTGTTCGGATTGAGGGGTTTAGGCTTGCTCAATGTCTATTGAGATCCCAAGATAATTGTTTAAAAGTCATTGGTTTGTGTGGTGAAGCTCTTGTTGGGGCCATAATTTGTGGAATGAGAGAAACTGGGCTGAGTTCTAAAAAAATTGGGAACAACCATGGGTCTTTGTCAGCGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCAGGTGATCATCATACAAATTTCTGGAAACAAGGAATTGATAGGGTTCTCCTTAATCTTCTGATTGAAAATATTCAAGACCAATTGTTTGAACCTGTATTGTCATTGGAAAAACAAATATACATGGCCAAAGAGGGATTAAAATCCAATTATCATCTTGGTCTTAGGAGCTATCTGTGGGACATTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTTAAACCCTTATACTCATGGTAATAATCCTCAGCAATTTTCTAGAGAGGTGACAAACATTAGAGGCCAGTTAGTTAGCAAATTTCAAGAGATCTGCAAAAGTAACTCTTTCAGTCCTGGTGTGAGGTGGTATGTTTCTTATATTCTAACTTATTTCAGATATTACGGTTTCCCAAATGAATTAGCCGAAAGGATTGGGAAATCTCTCAATAAGGAAGAATACTCAGATATGAATCTTGTCATAGCAACTGGGGAATCTCTGAGTGTTCATATTGTTATTCTTGCTGTTCGATGTCCGTCACTGCTGCCTCCTCGATTGTTACCTTGTAGGAAGAATTCTAAAGTGATAACAGATAAGTTTGTCAGAGAGTCCACAAGAGAAGTTCGATTATCTTCTTATGTTGATTATGAAGCATTGGTATTGTTATTGGAATATGTATACCTGGGATGCTTACATGCCAGTGAAGAAACAGCAAGGAAGCTGAAAATTCTTGCTAAGCACTGCAATCTACAGCCTTTGTTTCAAATGCTTCACAGGCAACGTCCAAAGTGGGGGACACCTTTCCCCAGCTTCAATCTTACTTCATCTCTTGATTTGGCTGGAAGTTGTTATTCGGATGTCATATTGGAAGCTAAATCAAATGAACTTGTTGGGTGGGCATGCAATATTTGTTCTGTTACAGTACCCCATAAGCATGTTCACAAAGTTATATTGCAGTCTGGCTGTGATTATCTACAAGGTTTGTTCCGGTCAGGGATGCAAGAAAGTCATTCGCAAGTCATAAAAGTTGATATTAGCTGGGAAGCATTGTGTAAACTAGTGCAGTGGTTTTATTCTGATGAGCTGCCTGATCCTCCCTCTGGATGCTTGTGGGATAATATTGATGATGAAGAAAAGCTATTTAATCTACAACCATATGTGGAGCTTTATTGGCTTGCTGAATTCTGGCTTTTGGAAAATATTCAGGAATCTTGCTGGAATGTGATTATGTCTTGTCTTGATGCTTCGTGGCAGTTATCCATTAAAATAATCAAAATGGCTTATAATCTCTCTTTGTGGAAGTTGGTTGACATAGCAGCAAATCTCATGGCTCCTTCATATTGTCAATTACGAGATTCTGGTGAACTAGAAGAGTTTGATGATGCGCTAGTGCACTTAATTTATTCTGCTTCTATTCAACTTAACCAAGAAAGAAAAAAGTGCTTTAGGTGA 2697 0.3949 GNVGETKGSGDGTDDIEGNVAPREGANAMTGDGLGLGASTWDGAEVAVGAILFVWACIFSAPADEGIGEETMKSGRDKEKENDRCISSHMQTLHRRLLHALNLGTRHFDEKTNRSRWQCANIEVQKNVLRSTGAFLDSLSGDARAARHAVVKESVPDILGALLWILQCKSEALLSMASKVTVKLVSVLPIPLLQSQHMLDLVYCLSSLLSSHQVEVAIPCATALKLVISNLSATSEKEVMEALKETEASIQIVGNIKDFAEGAKKIEYFEEMTLLLSTILWRWPPSRFPICNDVILMKVLANIQSRTNSSIKLALLKLYTSLALCDSVARKLIEDGEVFPQMFVQAMGKSNPHAVRIEGFRLAQCLLRSQDNCLKVIGLCGEALVGAIICGMRETGLSSKKIGNNHGSLSAEACQLALITRWAGDHHTNFWKQGIDRVLLNLLIENIQDQLFEPVLSLEKQIYMAKEGLKSNYHLGLRSYLWDILGWLTIHCGENLNPYTHGNNPQQFSREVTNIRGQLVSKFQEICKSNSFSPGVRWYVSYILTYFRYYGFPNELAERIGKSLNKEEYSDMNLVIATGESLSVHIVILAVRCPSLLPPRLLPCRKNSKVITDKFVRESTREVRLSSYVDYEALVLLLEYVYLGCLHASEETARKLKILAKHCNLQPLFQMLHRQRPKWGTPFPSFNLTSSLDLAGSCYSDVILEAKSNELVGWACNICSVTVPHKHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALCKLVQWFYSDELPDPPSGCLWDNIDDEEKLFNLQPYVELYWLAEFWLLENIQESCWNVIMSCLDASWQLSIKIIKMAYNLSLWKLVDIAANLMAPSYCQLRDSGELEEFDDALVHLIYSASIQLNQERKKCFR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01646 898 Pfam BTB/POZ domain 727 797 IPR000210 GO:0005515
Spst5g01646 898 MobiDBLite consensus disorder prediction 1 26 - -
Spst5g01646 898 SUPERFAMILY ARM repeat 123 575 IPR016024 -
Spst5g01646 898 ProSiteProfiles BTB domain profile. 570 650 IPR000210 GO:0005515
Spst5g01646 898 Gene3D Potassium Channel Kv1.1; Chain A 694 867 IPR011333 -
Spst5g01646 898 SUPERFAMILY POZ domain 547 672 IPR011333 -
Spst5g01646 898 CDD BTB_POZ_ZBTB_KLHL-like 699 782 - -
Spst5g01646 898 Gene3D Potassium Channel Kv1.1; Chain A 551 675 IPR011333 -
Spst5g01646 898 ProSiteProfiles BTB domain profile. 700 781 IPR000210 GO:0005515
Spst5g01646 898 SUPERFAMILY POZ domain 725 825 IPR011333 -
Spst5g01646 898 PANTHER OS06G0674800 PROTEIN 513 893 IPR044953 -
Spst5g01646 898 SMART BTB_4 570 680 IPR000210 GO:0005515
Spst5g01646 898 SMART BTB_4 700 828 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01646 Spst-Chr5 51291639 51301008 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Spst5g01646 BTB 4.4e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01646 - - gmx:100786565 741.88