Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01631 ATGGTTGAAGCAGCCTCGGTCTTGGTCTTGTCCGAAAAGGAAAAAGAGAAGATTCAAACCGAGTACGCGTTGGTTTATGGTTTCATCGTGATCATGCCTTTGATCATGGCTTTGTGTAAGTCGTCTTCTTCAGCCAGACAAGATCCAGAAATTGATGAAGTAATTGATTTTTTTATAAATATTTCAGGCATTCACAATGTTAAACTCTACTCCTACAAAGAATTAAAAAATGCCACCGAAGATTTTAGTCAAGCCAATAAAATCGGAGAGGGTGGTTTTGGTTCTGTCTACAAGGGACGACTTAAAGATGGAAAAGTTGCTGCAATAAAAGTTCTTGCTGCTGAATCAAGACAAGGAGTGAAGGAGTTCTTGACAGAGATTAAAGTGATCTCAGAGATAGAGCATGAAAATTTGGTTAAGTTATATGGTTGTAGTGTGGATAAAAATAACAGAATATTAGTCTACAATTACCTTGAGAATAACAGCCTCTCACAAACGCTTCTAGGTGGAAGTCACGGTAGGATCTACTTTGATTGGCGAACAAGATGTAAAATAAGCATTGGGATTGCTCGTGGACTGGCCTATCTTCATGAAGAAGTAAGGCCTCATATTGTTCACAGGGATATAAAGGCAAGCAATATCCTCCTTGACAAAGATCTTACACCCAAAATTTCAGATTTTGGTCTTGCGAAGCTTATTCCAGCAAACATGACTCATGTCAGCACTCGTGTGGCAGGAACAATAGGTTATTTGGCACCCGAGTATGCAATAGGGGGGAAGCTAACACGGAAAGCAGATGTTTACAGCTTTGGTGTCCTCCTTGTGGAGATAGTTAGTGGAAGATGTAACACAAACTCACGATTACCAATAGAAGAACAATTTCTTCTAGAGAGGACATGGGAACTTTATGAGCGAAAGGAATTGGTTGGACTGGTAGATTCATCACTGCAAGGGGAATTCGACGCCGTGCAGGCTTGTAAGTTTATGAAAATTGGTCTTCTTTGCACTCAGGAATCGCCAAAGCTCCGGCCATCCATGTCTTCTGTGGTGAAGATGCTCACGGGAAAAATGAATGTTGATGACAGTAAGATAACAAAACCTGCCTTAATTTCTGATTTTATGGACCTCAAAGTTAGAAGGGAAGAAGAAAGTGGTAGTGACGTGAAGAATTCATCTATGTTCAATACATCCTCTTCTTCATACAACCATGACACTACCATGTCATCTGCCACAACTACAACTTTCGCTGCAATATATGATGAAAGCATGTGA 1272 0.4025 MVEAASVLVLSEKEKEKIQTEYALVYGFIVIMPLIMALCKSSSSARQDPEIDEVIDFFINISGIHNVKLYSYKELKNATEDFSQANKIGEGGFGSVYKGRLKDGKVAAIKVLAAESRQGVKEFLTEIKVISEIEHENLVKLYGCSVDKNNRILVYNYLENNSLSQTLLGGSHGRIYFDWRTRCKISIGIARGLAYLHEEVRPHIVHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIGGKLTRKADVYSFGVLLVEIVSGRCNTNSRLPIEEQFLLERTWELYERKELVGLVDSSLQGEFDAVQACKFMKIGLLCTQESPKLRPSMSSVVKMLTGKMNVDDSKITKPALISDFMDLKVRREEESGSDVKNSSMFNTSSSSYNHDTTMSSATTTTFAAIYDESM 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01631 423 MobiDBLite consensus disorder prediction 388 405 - -
Spst5g01631 423 FunFam cold-responsive protein kinase 1 56 157 - -
Spst5g01631 423 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 37 395 - -
Spst5g01631 423 FunFam cold-responsive protein kinase 1 158 369 - -
Spst5g01631 423 ProSiteProfiles Protein kinase domain profile. 82 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01631 423 Gene3D Transferase(Phosphotransferase) domain 1 158 369 - -
Spst5g01631 423 Pfam Protein kinase domain 83 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01631 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Spst5g01631 423 MobiDBLite consensus disorder prediction 382 405 - -
Spst5g01631 423 SUPERFAMILY Protein kinase-like (PK-like) 57 354 IPR011009 -
Spst5g01631 423 Gene3D Phosphorylase Kinase; domain 1 59 157 - -
Spst5g01631 423 SMART serkin_6 82 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01631 423 CDD STKc_IRAK 88 355 - -
Spst5g01631 423 ProSitePatterns Protein kinases ATP-binding region signature. 88 110 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01631 Spst-Chr5 51090458 51095594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01631 70 368 Receptor kinase-like Gene Family AT1G53430 56.187 1.07e-106 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01631 Pkinase 6.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01631 - - gmx:100782320 650.588