Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01626 ATGGAGGATACTAATCAATGGTGTCGCTATGACCATGACCCACTTCTTCTCACGGACGTTTCTTTGCAACAAGAATCCTCTTCTTATACTCGCTGCTCCAATTCTCTTTCGCAATCATCACTGAGCTCTCAGGTTTTGGCTATGGAGGATGAGCCCGTGTGTGGTGACAGTCCTAGTATCGGGTTTTCACGGAAAAATGGAGGTTTTGAAGGGAACAGCGTGAAATTCGATGACCCAATTGTGAAAAATGTGGTTGATGGAAGATCCATTTTGGGGTATTCTCTGACATCCCCAGATTTGGTCATTTGTGCTGGCTCACCAGATGTAGCTGGAATTAGCCGTTGCGATTCTCCTGAATTTTTGAAGAACCAACATTGCAAGAATGTGGAGTCATCGATGGAGCTTTCTCTAGAGTATGGAATCAAGGGGTCTCAAGTTGAAGTTGACAAAGAGCATAAGATTCCAACTGTTAAATTCTCCAATTTCTGTCAAACTTTTGAGCAAGAGGAAGAGCTACTGAGCCCTGAAGCCTCCTTTGAGCTTCTTCCACCCCTTCTAACCAAGGATGAGTCACCCCACGATTCCCCTCTTAGAGATACTGAGATGCTAGAAGATAATGGAGTGTCTCAGGAGGGAGAATTGGAGTCCTCAGAAGATGCCGAGGATATTGGGGTAGAAGAGAAATTTAAAAGGCTGAAAAGAGACTTTGAGTATCAGAGAAAGGAGCTGGTAGAAACGAGGAGGGAGTTAGGGGAGATAAAAAAGGAGAATCAGCAGAAGAGTAGAGAATGTCAAGAAGCTTGGAACTCCTTGAAAGAGCTTCAGAATGAGCTAATGCGCAAGTCCATGCACGTAGGATCTTTAGCATTTGCCATTGAGGGGCAAGTGAAAGAGAAAAGTAGGTGGTTTTCGTCGCTGAGAGATTTAACAAGGAAATTGAAGATTATGAAAATGGAACACATAAAGCTATTAGGAGAAGCGGAGGCAAGCAAAAAATATCAAGCAGATATGAGAGAAATGGGGCTTATCATTAAGTCCAAAATTAATGAAAAACTGGAGTCCCATGAAGATCTCAAGTCTAAATATGTTGAAGGGGCTAAGGAACGGAAAGAGCTTTACAACAAGGTCTTGGAGTTGAGAGGAAACATAAGGGTCTTCTGCCGTTGTAGGCCTCTCAATGCAGAAGAGATAACTTCAGGAGCAACAATGGCCTTAGATTTTGAATCTGCGAAAGATGGTGAGCTAACTGTAATGTCAAATGGAGCTCCTAAAAAGACTTTTAAGTTCGATGCTGTCTTTCATCCCCAAGCTGAACAAGCTGATATTTTTGAAGACACGGCACCATTTGCGACATCAGTTCTAGATGGATTCAACGTATGCATTTTTGCATATGGACAGACTGGGACAGGGAAAACATTCACAATGGAGGGCACTGAAGAGGCTCGAGGTGTAAACTTTAGGACTCTCGAAAAAATGTTCGACATAATCAAGGAGAGACAGAAGTTTTATTGTTATGATATTTCTGTTAGTGTCTTAGAAGTGTACAATGAGCAAATAAGAGATTTGCTGGTTGCAGGAAATCATCAAGGAACAGCTGCAAAAAGACTTGAAATAAGGCAAGCTGGTGAAGGAATGCATCACATTCCAGGTTTGGTTGAGGCACATGTGAACAATATGACTGAAGTCTGGGAAGTCCTACAAACTGGTAGCAATGCAAGGGCAGTAAGCTCAACCAATTCCAATGAGCATAGCAGCCGATCACACTGCATTCACTGTGTTATGGTTAAGGGAGAGAATTTGTTGAATGGAGAATGCACGAGAAGCAAGCTATGGTTGGTAGATCTAGCAGGCAGTGAGCGAGTGGCAAAGACAGAAGTTCATGGTGATAGATTGAAGGAGACACAAAATATTAACAGGTCTCTATCTGCACTTGGTGATGTCATATCAGCTCTTGCAACGAAAAGTTCACACATCCCTTTCAGGAACAGCAAGCTTACACACTTGCTGCAAGACTCATTAGGAGGAGATTCGAAGGCACTCATGTTTGTACAGATCAGTCCTAATGAAAACGATTTGAGTGAGACGATTTGCTCTCTTAACTTCGCCAGTAGAGTGAGAGGAATAGAATTGGGCCCTGCAAGAAAGCAGTTGGACACTGTTGAGCTTTTGAGACACAAACAAATGGCTGATAAAGTCAAACAAGAGGTAAAGCTGAAGGATTTGCAAATCAAGAAGATGGAGGAAACAATCCATGGATTAGAGTCCAAGGTGAAGGAAAGAGATATCAAAAACAAAAATATGCAAGAGAAGGTCAAGGAACTGGAGTCACAGCTTCTGATTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCACCAACTGAAACATCAAGAAGAGCAAAATAATGCACTTATGAGATCAGCAGTTGCAAATAGAACGCTAGGAAATCTCAAGAATTTCAATGATACAGTGAGTGGTGGCTGGTGCAAAGACCAACAAATGAATTCAGCTAAACCACTCGCAGAGAACAACAACATCTTTAAACCTTTTATACCCTTTGCTACGATGGAGAGCTCCCTTAAGTGCATTGACCATTCTGAGAAAGAAAACAATCCTGAGATGGCTGATAAAGCCCTACTGCCAAAGAGGCCTGGAAGAGCTTCTTCAATTTGTATGATGGCACCACGTGTTCCTTCAGCCATTGCTTCAAGGAGAAACTCTCTGATTCCACTCCCAAGTATTCCTAGCTTAACACAGTTCCAATCACCATTTTTACCAATTTTAACAAACCAAGCTGATCAGAAAGATGTCATTGGGGAAGCAGAAGCCAATTGTTTGCCTGTACAACAGACTCATTGTGAGAGCCCCAAAGAAGTTAGAAGTGGTGCTAAGAGGATAGGTAGCATACTAAGAAGAAGCCTGCATAAGAAAATCCAGGTGAAGTCTCCACTTCAGCAGCACATGAGGAAGGTTGGTGTCAATGTAGGGATGGAGAAAGTTAGAGTTTCCATTGGAAGAATGGGGAGATTAGGTCCGAGGGGGCAAGTAGGAAGTGGTAGAAAAGGAGGAGCTAAAGATACTCAACAAAAAAACAGTCAAAAGGAAAAGGAAAGGGGATGGATCTGA 3141 0.4257 MEDTNQWCRYDHDPLLLTDVSLQQESSSYTRCSNSLSQSSLSSQVLAMEDEPVCGDSPSIGFSRKNGGFEGNSVKFDDPIVKNVVDGRSILGYSLTSPDLVICAGSPDVAGISRCDSPEFLKNQHCKNVESSMELSLEYGIKGSQVEVDKEHKIPTVKFSNFCQTFEQEEELLSPEASFELLPPLLTKDESPHDSPLRDTEMLEDNGVSQEGELESSEDAEDIGVEEKFKRLKRDFEYQRKELVETRRELGEIKKENQQKSRECQEAWNSLKELQNELMRKSMHVGSLAFAIEGQVKEKSRWFSSLRDLTRKLKIMKMEHIKLLGEAEASKKYQADMREMGLIIKSKINEKLESHEDLKSKYVEGAKERKELYNKVLELRGNIRVFCRCRPLNAEEITSGATMALDFESAKDGELTVMSNGAPKKTFKFDAVFHPQAEQADIFEDTAPFATSVLDGFNVCIFAYGQTGTGKTFTMEGTEEARGVNFRTLEKMFDIIKERQKFYCYDISVSVLEVYNEQIRDLLVAGNHQGTAAKRLEIRQAGEGMHHIPGLVEAHVNNMTEVWEVLQTGSNARAVSSTNSNEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVHGDRLKETQNINRSLSALGDVISALATKSSHIPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPARKQLDTVELLRHKQMADKVKQEVKLKDLQIKKMEETIHGLESKVKERDIKNKNMQEKVKELESQLLIERKLARQHVDSKIAEQHQLKHQEEQNNALMRSAVANRTLGNLKNFNDTVSGGWCKDQQMNSAKPLAENNNIFKPFIPFATMESSLKCIDHSEKENNPEMADKALLPKRPGRASSICMMAPRVPSAIASRRNSLIPLPSIPSLTQFQSPFLPILTNQADQKDVIGEAEANCLPVQQTHCESPKEVRSGAKRIGSILRRSLHKKIQVKSPLQQHMRKVGVNVGMEKVRVSIGRMGRLGPRGQVGSGRKGGAKDTQQKNSQKEKERGWI 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01626 1046 ProSitePatterns Kinesin motor domain signature. 608 619 IPR019821 GO:0003777|GO:0005524|GO:0007018
Spst5g01626 1046 Coils Coil 729 749 - -
Spst5g01626 1046 MobiDBLite consensus disorder prediction 1010 1046 - -
Spst5g01626 1046 Gene3D Kinesin motor domain 326 710 IPR036961 -
Spst5g01626 1046 MobiDBLite consensus disorder prediction 1032 1046 - -
Spst5g01626 1046 MobiDBLite consensus disorder prediction 206 221 - -
Spst5g01626 1046 MobiDBLite consensus disorder prediction 186 221 - -
Spst5g01626 1046 FunFam kinesin-like protein KIN-14R 327 710 - -
Spst5g01626 1046 Coils Coil 243 277 - -
Spst5g01626 1046 ProSiteProfiles Kinesin motor domain profile. 382 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g01626 1046 PANTHER KINESIN-LIKE PROTEIN KLP-3 171 862 IPR027640 GO:0003777|GO:0007018
Spst5g01626 1046 Pfam Kinesin motor domain 388 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g01626 1046 CDD KISc_C_terminal 380 710 - -
Spst5g01626 1046 MobiDBLite consensus disorder prediction 191 205 - -
Spst5g01626 1046 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 382 746 IPR027417 -
Spst5g01626 1046 Coils Coil 757 784 - -
Spst5g01626 1046 PRINTS Kinesin heavy chain signature 578 595 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g01626 1046 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g01626 1046 PRINTS Kinesin heavy chain signature 658 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g01626 1046 PRINTS Kinesin heavy chain signature 609 627 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Spst5g01626 1046 SMART kinesin_4 380 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01626 Spst-Chr5 51015844 51020712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01626 357 735 Calmodulin-binding Proteins AT5G65930 42.298 3.78e-80 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01626 K10406 - gmx:100817247 1835.08