Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01624 ATGGCATTGGAGTGTGGTTTTCATTTCCTGAATGGGGTTTACACGATGCTGTTGTTTTGCCTTGGCATTGTGCTTGTGAATTCGGTTAATGAAGAGGGCTCAAGTCTTTTGATGTTTAAAGCTTCCCTTCTTGACCCAAGCAACAATCTCTATAACTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTTTATTGCACGGGTTCAGTAGTAACTTCTGTGAAACTTCACCAACTTAATCTGTCTGGTACTTTGGCTCCTACAATCTGTAATCTTCCAAAGCTGCTTTTGTTGAATTTGTCAAAAAATTTCATCTCTGGCCCTATTCCTGATGGTTTTGTTGAGTGTGGTAGTTTGGAGGTTTTGGACCTTTGCACAAATAGGCTTCATGGACCCCTTCTGACCCCTATTTGGAAAATCACAACACTTAAAAAGCTCTACCTGTGTGAAAACTATATGTATGATGAAGTGCCAGAGGAGCTTGGGAATTTGGTGTCACTTGAGGAGCTAGTCATTTATAGCAATAATTTAACTGGGAGAATTCCCTCTTCAATAAGAAAGTTGAAGCAGCTTAGAGTTATAAGGGCAGGTTTGAATGCCCTCTCCGGGCCAATACCTTCTGAAATCAGTGAGTGTGAGAGCTTGGAGATATTAGGGTTGGCACAGAATCAGTTAGAAGGTTCCATTCCAAGGGAGCTTCAAAAGCTTCAGAACCTCACCACTATACTTCTATGGCAAAACTCTTTCTCTGGGGAGATTCCTCCTGAGATTGGAAACATTAGTAGCTTGGAACTGCTCGCTTTGCACCAAAATTCACTAACTGGTGGTGTTCCCAGGGAACTCGGAAAGCTGTCCCAGTTGAAGAGGTTGTACATGTACACCAACTTGTTGAATGGAACAATTCCACCAGAGCTAGGAAACTGCACAAATGCTATTGAGATAGACCTATCTGAAAACCATTTGATTGGGATCATTCCCAAGGAGTTGGGCCTAATATCTAATCTTAGCTTGCTTCATTTGTTTGAAAACAATCTGCAGGGTCATATTCCAAGGGAGCTTGGTCAGTTGAGGGTGTTAAGAAAATTAGACCTGTCACTAAATAACTTGACAGGTACAATTCCACTGGAGTTTGAAAACCTTACATACATGGAAGATTTGCAGCTATTTGACAATCATCTTGATGGTGTGATTCCTCCTCAGCTGGGAGCTATTAGAAACCTTACTATTCTTGATATATCTGCAAACAACCTTTTTGGTATGATACCTGTTCATCTTTGTGCATATCAGAAGCTGCAATTCCTTAGCCTTGGGTCAAATAGGTTGCTTGGAAATATTCCTTATAGCCTCAGAACGTGCAAATCTCTTGTGCAGCTTATGCTGGGGGACAACCTGTTGACAGGAAGCCTACCTGTTGAATTGTATGACCTTCACAATCTCACTGCACTTGAACTCTTTCAGAACAGATTTTCGGGGATAATAAACCCGGGGATAGGCCAACTTAGGAATCTAGAGAGGCTTCTCTTGTCAGCTAACTACTTTGAAGGCTATCTCCCTTCTGAGATTGGAAGTTTGACACAACTTGTCACATTCAATGTTTCCTCTAACCGTTTCAGTGGAAGCATACCTCATGAGTTGGGAAACTGTGTTAGACTGCAGAGGCTTGATCTTAGCAGGAACCACTTCACTGGTATGCTTCCAAATGAAATTGGCAGCCTGGTGAACTTGGAACTGTTGAAAGTTTCTGATAACATGCTCTCAGGAGAAATACCAGGCAGTTTGGGGAACCTTATTCGGCTCACAGACCTCGAACTGGGTGGCAACCAGTTTTCAGGAAGCATCTCTTTTCATTTGGGAAGACTTGCAGCTCTTCAGATCGCTCTAAACCTGAGCCACAACAAACTTTCTGGCTCAATTCCTGACAGTCTTGGGAACTTACAAATGCTAGAGTCCCTTTACCTAAATGACAATCAACTTGTTGGTGAGATTCCTGCATCAATTGGTGACCTTCTCAGTCTTGTCGTATGCAATGTATCTAACAACAAGCTAGTAGGAACTGTTCCAGACACCAATACATTTAGAAAGATGGATTTCACTAACTTCGTGGGGAACAACGGTTTGTGCCGAGTCGGTACCAGTCATTGCCATCCATCTATATCTTCCTTTCATGCTGGGAAACAAAGCTGGATCAGAAATGGTTCCTCAAGGGAAAAAATAGTGAGCATTGTTTCTGGGGTGATTGGACTAGTTTCTCTTATTTTCATAGTGTGCATATGTTTGGCCATGAGGCGCCGAAGCCATGATGCTTTTGTTTCACTTGAAGGGCAAACTAAGACTAATGTCTTGGATAACTACTACTTTCCTAAAGAAGGGTTTACATACCAGGATCTGTTGGAAGCCACTGGCAATTTTTCAGAAAATGCAGTTCTAGGAAGAGGAGCTTGTGGCACTGTTTACAAGGCTGTTATGAGTGATGGTGAAGTGATTGCTGTCAAGAAGCTGAATTCTCGAGGAGAGGGAACAAATAGTGTTGACCGAAGCTTCCTTGCCGAGATTTCAACCCTTGGAAAGATCAGGCACAAGAACATTGTGAAGCTGTATGGATTTTGCTACCACGAGGATTCTAATCTTCTCTTATATGAATACATGGAAAATGGAAGCCTTGGGGAACAACTTCATTCAAGTGCAACCACTTGTGCATTGGATTGGAGTAGTCGATATAAAATTGCTCTTGGAGCAGCGGAAGGCTTATACTATCTTCATTATGATTGCAAACCTCAAATCATTCATCGTGACATAAAGTCAAACAACATATTACTTGATGAGGTGTTTCAGGCTCACGTAGGAGACTTTGGCCTGGCAAAGTTGATTGATTTTTCTTTCTCAAAATCCATGTCTGCTGTGGCTGGTTCCTATGGCTACATTGCCCCAGAATATGCTTACACCATGAAGGTGACTGAGAAGTGTGACATCTATAGCTTTGGGGTAGTTTTGCTTGAACTAGTTACTGGGAGGTCACCTGTTCAACCTTTGGAACAAGGTGGTGACCTGGTGACTTGTGTGAGAAGGGAAATTCAAACATCAGTACCAACATCTGAATTATTTGACAAGAGATTGAATCTTAGTGCTCCAAAGACAGTTGAAGAAATGTCTCTTATTCTCAAAATTGCCCTGTTCTGCACCAGCACATCACCAATTAATAGGCCTACAATGAGAGAGGTCATTGCAATGTTGATTGATGCTAGGGAATATGTCAGTAATTCACCAACCTCTCCTACATCAGAATCTCCATTGGATGAGGATGATGGAATTTCTTCCAAAGATGATGGTCTTGAATTGTAA 3345 0.4194 MALECGFHFLNGVYTMLLFCLGIVLVNSVNEEGSSLLMFKASLLDPSNNLYNWNSSDLTPCNWTGVYCTGSVVTSVKLHQLNLSGTLAPTICNLPKLLLLNLSKNFISGPIPDGFVECGSLEVLDLCTNRLHGPLLTPIWKITTLKKLYLCENYMYDEVPEELGNLVSLEELVIYSNNLTGRIPSSIRKLKQLRVIRAGLNALSGPIPSEISECESLEILGLAQNQLEGSIPRELQKLQNLTTILLWQNSFSGEIPPEIGNISSLELLALHQNSLTGGVPRELGKLSQLKRLYMYTNLLNGTIPPELGNCTNAIEIDLSENHLIGIIPKELGLISNLSLLHLFENNLQGHIPRELGQLRVLRKLDLSLNNLTGTIPLEFENLTYMEDLQLFDNHLDGVIPPQLGAIRNLTILDISANNLFGMIPVHLCAYQKLQFLSLGSNRLLGNIPYSLRTCKSLVQLMLGDNLLTGSLPVELYDLHNLTALELFQNRFSGIINPGIGQLRNLERLLLSANYFEGYLPSEIGSLTQLVTFNVSSNRFSGSIPHELGNCVRLQRLDLSRNHFTGMLPNEIGSLVNLELLKVSDNMLSGEIPGSLGNLIRLTDLELGGNQFSGSISFHLGRLAALQIALNLSHNKLSGSIPDSLGNLQMLESLYLNDNQLVGEIPASIGDLLSLVVCNVSNNKLVGTVPDTNTFRKMDFTNFVGNNGLCRVGTSHCHPSISSFHAGKQSWIRNGSSREKIVSIVSGVIGLVSLIFIVCICLAMRRRSHDAFVSLEGQTKTNVLDNYYFPKEGFTYQDLLEATGNFSENAVLGRGACGTVYKAVMSDGEVIAVKKLNSRGEGTNSVDRSFLAEISTLGKIRHKNIVKLYGFCYHEDSNLLLYEYMENGSLGEQLHSSATTCALDWSSRYKIALGAAEGLYYLHYDCKPQIIHRDIKSNNILLDEVFQAHVGDFGLAKLIDFSFSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELVTGRSPVQPLEQGGDLVTCVRREIQTSVPTSELFDKRLNLSAPKTVEEMSLILKIALFCTSTSPINRPTMREVIAMLIDAREYVSNSPTSPTSESPLDEDDGISSKDDGLEL 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01624 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 280 382 - -
Spst5g01624 1114 SMART serkin_6 805 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01624 1114 SUPERFAMILY RNI-like 364 686 - -
Spst5g01624 1114 Gene3D Ribonuclease Inhibitor 233 330 IPR032675 -
Spst5g01624 1114 Gene3D Ribonuclease Inhibitor 141 232 IPR032675 -
Spst5g01624 1114 SUPERFAMILY Protein kinase-like (PK-like) 782 1079 IPR011009 -
Spst5g01624 1114 Pfam Protein kinase domain 806 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01624 1114 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Spst5g01624 1114 Gene3D Ribonuclease Inhibitor 31 140 IPR032675 -
Spst5g01624 1114 Gene3D Ribonuclease Inhibitor 334 402 IPR032675 -
Spst5g01624 1114 ProSiteProfiles Protein kinase domain profile. 805 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01624 1114 Gene3D Phosphorylase Kinase; domain 1 769 883 - -
Spst5g01624 1114 Pfam Leucine Rich Repeat 552 574 IPR001611 GO:0005515
Spst5g01624 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 408 720 - -
Spst5g01624 1114 SMART LRR_typ_2 551 573 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 358 381 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 574 598 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 526 550 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 647 671 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 478 502 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 166 190 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 286 310 IPR003591 -
Spst5g01624 1114 SMART LRR_typ_2 94 118 IPR003591 -
Spst5g01624 1114 Gene3D Ribonuclease Inhibitor 403 722 IPR032675 -
Spst5g01624 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 883 - -
Spst5g01624 1114 SUPERFAMILY L domain-like 45 394 - -
Spst5g01624 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 183 279 - -
Spst5g01624 1114 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 884 1096 - -
Spst5g01624 1114 FunFam Leucine-rich repeat receptor-like protein kinase 29 182 - -
Spst5g01624 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Spst5g01624 1114 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 478 1080 - -
Spst5g01624 1114 Gene3D Transferase(Phosphotransferase) domain 1 884 1097 - -
Spst5g01624 1114 MobiDBLite consensus disorder prediction 1087 1114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01624 Spst-Chr5 50981294 50985279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01624 51 1084 Receptor kinase-like Gene Family AT1G73080 36.972 0.0 611
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst5g01624 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01624 - - gmx:100818311 1989.54