Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01606 ATGGCTAAGAAGGGTTGGTTTAGCATGATTAAGAAGCTCTTTTTATCGGGGACACAGCCCTCACAAGAGAAGAATGAAAGAAGGGCTTGGATATTTGGGAGGGTTAAGACCAAGAGACTGCCTTCAATTACAGCTCCACCACCCACAAAAGAACCAAGACTAAGTGAAGCTGAAGATGAACACAGCAAGCATGCTTTAACAGTGGCCATTGCTTCAGCTGCTGCTGCTGAAGCTGCTATTACCGCTGCTCAGGTTGCTGTTGAGGTTGTCAGGCTCCAATCAGCTCATCAACAACTTAAAGAAAAACAAGAACAGCTTCAACCTGTTAAAACTAGGCATGATACTCCTCATTCCACACACCACTGCCAGAGGAAGACGGAAGAATCTTCAGCCATCAAAATTCAAACAGCATTTAGAGGTTACCTAGCAAGGAAAGCTTTGAGAGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGAAGAGCTGTGAGACGCCAAGCTTTGTGCACTCTGAAGTGCTTGGAATCCATAGTAAGTATCCAGACACAGGTCTTTGCAAGGAGACTCCAAATGGTTAAAGGAAGATGGGATTGTGGTGAACATGAAGATATGCAAGGTTCAAGAGACAAGATAATAAGGATGGACTCAAATAGTGAGAGAAGGTGGGATGACAGTATTTTGTTGAAGAAAGAGGTAGATGCCTCTTCCATTAGCAAGAAAGAAGCAGTTGTTAAGCGAGAAAAAGTAAAAGAATATTCATTTAACCACAGAAAGTCAGCTGAATCAGAAAGAAACAAAATTAATGGGAGATGGAGGTATTGGATGGAGCAGTGGGTAGACACACAACTTTCCAAGAGTAAAGAACTTGAAGATTTAGACTCAGTTTTAAGCTCACATTACTCTAGACCTGGGGAGGAAAGTGGAAAGAGACAACTAAGGCTCAGAAATACTCACAGACAAAATCAGGTTGAAGGATTAGATTCTCCGGCACTTTCTTCAAGGACCACATTTCCCCAGAGGAGCCAGAATTCAGAGGCAGAAGATCACTCATTCCCAAGCTCACCTGCAATTCCTACATACATGGCTGCAACAAAATCAACACAAGCAAAAGCCAGATCAACAAGCTCTCCAAGAGCAAGGATAGGAGGGAATTTTGACATGAACTCTGATAGCTATTCACCATGCAAAAAAAAGCTACCTATTGTGACTTCTATTAATAGTGAAGTGCTTAGTATTGGTAGGATGGGAAAGCTAAGTAGCAATCAGCAAAGATCTCCAAGCTTAAAGGGCCTTCCCAGACCTCTGAAATTAAGTCAGACATTGAGGGATCTCAGCATGAACTCCGATTGCTCAGTGCCGATTTCAGATCAAGAAAGTTCCTTCAAATGA 1395 0.4244 MAKKGWFSMIKKLFLSGTQPSQEKNERRAWIFGRVKTKRLPSITAPPPTKEPRLSEAEDEHSKHALTVAIASAAAAEAAITAAQVAVEVVRLQSAHQQLKEKQEQLQPVKTRHDTPHSTHHCQRKTEESSAIKIQTAFRGYLARKALRALKGIVKLQAIIRGRAVRRQALCTLKCLESIVSIQTQVFARRLQMVKGRWDCGEHEDMQGSRDKIIRMDSNSERRWDDSILLKKEVDASSISKKEAVVKREKVKEYSFNHRKSAESERNKINGRWRYWMEQWVDTQLSKSKELEDLDSVLSSHYSRPGEESGKRQLRLRNTHRQNQVEGLDSPALSSRTTFPQRSQNSEAEDHSFPSSPAIPTYMAATKSTQAKARSTSSPRARIGGNFDMNSDSYSPCKKKLPIVTSINSEVLSIGRMGKLSSNQQRSPSLKGLPRPLKLSQTLRDLSMNSDCSVPISDQESSFK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01606 464 SMART iq_5 126 148 IPR000048 GO:0005515
Spst5g01606 464 PANTHER IQ-DOMAIN 5-RELATED 1 406 - -
Spst5g01606 464 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
Spst5g01606 464 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Spst5g01606 464 MobiDBLite consensus disorder prediction 40 60 - -
Spst5g01606 464 MobiDBLite consensus disorder prediction 359 389 - -
Spst5g01606 464 Pfam Protein of unknown function (DUF4005) 342 430 IPR025064 -
Spst5g01606 464 Gene3D - 127 177 - -
Spst5g01606 464 MobiDBLite consensus disorder prediction 442 464 - -
Spst5g01606 464 Coils Coil 82 102 - -
Spst5g01606 464 MobiDBLite consensus disorder prediction 300 389 - -
Spst5g01606 464 MobiDBLite consensus disorder prediction 418 464 - -
Spst5g01606 464 MobiDBLite consensus disorder prediction 320 352 - -
Spst5g01606 464 MobiDBLite consensus disorder prediction 101 128 - -
Spst5g01606 464 Pfam IQ calmodulin-binding motif 129 148 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01606 Spst-Chr5 50622624 50625054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01606 3 464 IQD Protein Family AT5G13460 42.857 2.66e-98 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01606 - - gmx:100794802 728.013