Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01601 ATGGATGATGGAAATGCTGAGCTTTCTGATAAGCTTTCAGATAATGTTCTATTTTTGAATCCAGAGTCATCTAGCAGTTTTCAGGTTTCAACATCTGCGAACACAGTTCCTGAATTATGTAGGAGTACCAGCAGAACATGCACCCACACTCACACTTGCAATCCACCTGGCCCTGATGCTGCTCACACACACACATGCTATCACACGCACACTCAAATTTTTGCACCTGATGACGAGGACAAGGAGCACACCAACTCGAAACCAAAAAGGCCTTCTGGCAACCGAGAAGCAGTTAGGAAGTATAGGGAGAAGAAGAAGGCACAAACAGCATACTTGGAGGAGGAAGTTAAGAAATTGCGTATGGTGAATCAGCAACTAGTAAGGAAACTACAAGGGCAGGCACTTCTTGAAGCAGAACTGGCAAGGTTGAGGAGCATTTTGGCACACCTTAAGGGGAAAATAGACAGTGAATTGGGTGCTTTCCCATTTCAAAAGCAGTGCAACTCGTCTTACATTTTCAAAGAAGGGGATGCTGGTTTGCTGTCCACAGCAAGGACAATTGGTCTTCAGTGTCAGAACAACTTGTCATGCTTCCATCCACATGCAGGATCATCATCCCAGGTCAACAACATTTGTGAATATGGAAAGTCCATGAGTCCATGGGAAGGAAACTGCCAACCTGAAGTTGTAGATTGTCAAGTAGATGCAAATAACATGACCAGTACTGAAGGACAAACTGTGGATACTGTGGATAACTTCTTATCATCTGCATCTCAAGAGGGATAG 786 0.4415 MDDGNAELSDKLSDNVLFLNPESSSSFQVSTSANTVPELCRSTSRTCTHTHTCNPPGPDAAHTHTCYHTHTQIFAPDDEDKEHTNSKPKRPSGNREAVRKYREKKKAQTAYLEEEVKKLRMVNQQLVRKLQGQALLEAELARLRSILAHLKGKIDSELGAFPFQKQCNSSYIFKEGDAGLLSTARTIGLQCQNNLSCFHPHAGSSSQVNNICEYGKSMSPWEGNCQPEVVDCQVDANNMTSTEGQTVDTVDNFLSSASQEG 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01601 261 Gene3D - 75 151 - -
Spst5g01601 261 SMART brlzneu 79 149 IPR004827 GO:0003700|GO:0006355
Spst5g01601 261 MobiDBLite consensus disorder prediction 74 101 - -
Spst5g01601 261 CDD bZIP 94 141 - -
Spst5g01601 261 PANTHER CCAAT/ENHANCER BINDING PROTEIN 20 162 IPR031106 GO:0003700|GO:0006351
Spst5g01601 261 SUPERFAMILY Leucine zipper domain 89 131 IPR046347 GO:0003700|GO:0006355
Spst5g01601 261 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 150 IPR004827 GO:0003700|GO:0006355
Spst5g01601 261 Pfam Basic region leucine zipper 86 139 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01601 Spst-Chr5 50558044 50558829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01601 43 183 bZIP Transcription Factor Family AT3G51960 55.172 2.87e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst5g01601 bZIP_2 1.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01601 K25785 - gmx:100527780 380.948