Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01580 ATGGCAGACGAGGTTGTTTTGTTGGATACATGGGCCAGCATGTTTGGGATGAGGGTTAGGATTGCATTGGCTGAAAAGGGTGTTAAGTATGAGTACAAGGAAGAGAATCTCTGGAACAAGAGTCCTTTGCTTTTGCAAATGAACCCTATTCACAGGAAGATTCCAGTTCTCATCCATAATGGAAAACCCATTTGTGAGTCTGCAATAATAGTGCAGTACATTGATGAGGTCTGGAATCACAACCCTCCACTCATGCCCTCTGACCCTTACGAGCGAGCTCAAGCCAGATTCTGGGTGGATTACATTGATAAAAAGGTGTATGATACTTGGAGGAAAATGTGGCTTTCTAGTGGAGAGGAGCATGAGACATGGAAGAAGGAGTTGATCTCTATCTTTAAGCAACTAGAAGAGACACTAGGTGGCAAACCTTTTTATGGTGGTGACACGTTTGGGTTTTTGGATATTGGTCTGATCCCATTTTATAGCTGGTTTTATACTTTTGAGACTCATGGTAACTTCAAAATGGAAGCAGAATGTCCTAAACTGGTGGCTTGGGCCAAGAGATGCATGGAGAGAGAGACTGTGTCCAAAACTCTTCCTGATGAAAAGAAGGTGCATGATCATGTTCTGGGAATGAAGAAGGCACTTGAGTCAAAATAG 660 0.4288 MADEVVLLDTWASMFGMRVRIALAEKGVKYEYKEENLWNKSPLLLQMNPIHRKIPVLIHNGKPICESAIIVQYIDEVWNHNPPLMPSDPYERAQARFWVDYIDKKVYDTWRKMWLSSGEEHETWKKELISIFKQLEETLGGKPFYGGDTFGFLDIGLIPFYSWFYTFETHGNFKMEAECPKLVAWAKRCMERETVSKTLPDEKKVHDHVLGMKKALESK 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01580 219 Pfam Glutathione S-transferase, C-terminal domain 124 188 - -
Spst5g01580 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Spst5g01580 219 Gene3D Glutaredoxin 1 87 - -
Spst5g01580 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Spst5g01580 219 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Spst5g01580 219 SUPERFAMILY GST C-terminal domain-like 76 213 IPR036282 -
Spst5g01580 219 CDD GST_N_Tau 5 78 - -
Spst5g01580 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Spst5g01580 219 Pfam Glutathione S-transferase, N-terminal domain 7 76 IPR004045 -
Spst5g01580 219 SFLD Glutathione Transferase (cytosolic) 2 218 IPR040079 -
Spst5g01580 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Spst5g01580 219 FunFam Tau class glutathione S-transferase 1 87 - -
Spst5g01580 219 Gene3D - 88 218 - -
Spst5g01580 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Spst5g01580 219 FunFam Glutathione S-transferase U20 88 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01580 Spst-Chr5 50253204 50253973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01580 1 216 Glutathione S-transferase Gene Family AT1G17180 62.963 1.50e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01580 K00799 - gmx:106796199 409.068