Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01579 ATGGAGGAGGATAAGGTGGTTTTGTTAGGCTCAGGGTTCAGTATGTTTGGGATGAGAGCTAAGATAGCTTTAGCTGAGAAAGGAATCAAATATGAGTACATAGAAGAAGATCTCACCAACAAGAGCTCCTTGCTTCAAGAAATGAATCCAATTCACAAGAAAATTCCAGTTCTCATACATCATGGAAGACCGATCTGTGAGTCCCTCATAATTGTTGAGTATATTGATATGGTTTGGCACAGCAATTCTCCTTTGCTTCCCTTTGATCCCTACCTCAAATCACAAGCCAAATTCTGGGCTGATTTTGTAGATCAGAAGGTGTATCATGCTTCTAGGAGAGTATGGATTTCAAAGGGAGATGAGCAAGAGGTGGCAAAGAAGGACTTCCTCGAGAGCTTAAAGCATTTGGAGGAGTTTCTTGGAGACAAGCCTTATTTTGGTGGTGAAACATTTGGGTTTGTTGATGTTGCTCTCATTCCATTTTATTGCTGGTTTTATACTTATGAGACTTTTGGCAACTTCAAAGTGGAGTCAGTGTGTCCAAAACTCATCTCCTGGGCTAAGAGATGCATGCAGAAGGAAAGTGTATCTGAAACTCTTGCAGATGAGAAGGAGGTTTATGAGTCTGTTTTGGATTATAAGACAAGATTTATATTAAATTAA 663 0.3967 MEEDKVVLLGSGFSMFGMRAKIALAEKGIKYEYIEEDLTNKSSLLQEMNPIHKKIPVLIHHGRPICESLIIVEYIDMVWHSNSPLLPFDPYLKSQAKFWADFVDQKVYHASRRVWISKGDEQEVAKKDFLESLKHLEEFLGDKPYFGGETFGFVDVALIPFYCWFYTYETFGNFKVESVCPKLISWAKRCMQKESVSETLADEKEVYESVLDYKTRFILN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01579 220 Gene3D - 89 220 - -
Spst5g01579 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Spst5g01579 220 Pfam Glutathione S-transferase, N-terminal domain 12 76 IPR004045 -
Spst5g01579 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Spst5g01579 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Spst5g01579 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Spst5g01579 220 FunFam Tau class glutathione S-transferase 1 88 - -
Spst5g01579 220 Pfam Glutathione S-transferase, C-terminal domain 125 189 - -
Spst5g01579 220 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Spst5g01579 220 SUPERFAMILY GST C-terminal domain-like 80 216 IPR036282 -
Spst5g01579 220 Gene3D Glutaredoxin 2 88 - -
Spst5g01579 220 CDD GST_N_Tau 6 79 - -
Spst5g01579 220 FunFam Glutathione S-transferase U20 89 220 - -
Spst5g01579 220 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Spst5g01579 220 SFLD Main (cytGST) 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01579 Spst-Chr5 50251604 50252349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01579 4 218 Glutathione S-transferase Gene Family AT1G78380 59.535 2.19e-97 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01579 K00799 - gmx:548030 403.29