Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01568 ATGGCTTCTTTCCAAAGCATCAGCATTGAAGCTCAACTTTCAGAAGAGGTTCTCATAGCTCAGATCATGCAACTTCATGCAAGCATCTCCAAGCTTGAATCCCTTAGGCCTTGCAAGCAAGTGAATAGCCTCTTCACTCACCTTGTGAAACTTTGCACCCTCCCTTCATCCATTGACATTGAGGCCTTGCCCCAAGAGGTGAAAGACATGCGTCAGAGCCTCATTAACCTTTGTGGCCATGCTGAAGGGCTCTTAGAGCTTGAATTCTCAATCTTCATAAGCCTCACACCCGAGCCCTTCAAGAATGTGACCCTTTTCCCTTACTATGGGAACTATGTGAAACTAGCTCACATGGAAAACAAAATCTTGAAAGAAAATGGGGTGGTGAATGCAAAGAAAGTGGCCTTTGTAGGGTCAGGTCCAATGCCTCTCACTTCCATCATAATGGCCACTCACCACATGGAGTCCACACACTTTGACAACTTTGACATTGATGAGAAGGCCAACGAGGTGGCTCGCAAGATTGTAGCTTCTGATGCTGCACTTGAGAAGAGGATGAAGTTTGAAACACAAGACATCATGGAAGTGGGAGAGAGGTTGGGGCAATATGATTGCATCTTTTTGGCAGCACTTGTGGGCCTGAATAGGGAAGCAAAAGTGAAGATTTTGGGACACATAAGGAAGTATATGAAGGAGGGAGGGACTTTGCTAGTAAGAAGTGCAAAAGGGGCAAGAGCTTTCCTGTACCCTATTCTTGAGGACCGTGACATGGTGAATTTTGATGTTCTTACCATCTTTCACCCCACAAATGATGTCATCAACTCGGTTGTTCTTCTTCGCAAGCCTAAAGCTTAG 855 0.4538 MASFQSISIEAQLSEEVLIAQIMQLHASISKLESLRPCKQVNSLFTHLVKLCTLPSSIDIEALPQEVKDMRQSLINLCGHAEGLLELEFSIFISLTPEPFKNVTLFPYYGNYVKLAHMENKILKENGVVNAKKVAFVGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEVARKIVASDAALEKRMKFETQDIMEVGERLGQYDCIFLAALVGLNREAKVKILGHIRKYMKEGGTLLVRSAKGARAFLYPILEDRDMVNFDVLTIFHPTNDVINSVVLLRKPKA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01568 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
Spst5g01568 284 CDD AdoMet_MTases 162 238 - -
Spst5g01568 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Spst5g01568 284 PANTHER NICOTIANAMINE SYNTHASE 3 13 282 IPR004298 GO:0030410|GO:0030418
Spst5g01568 284 Gene3D Vaccinia Virus protein VP39 14 283 IPR029063 -
Spst5g01568 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 240 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01568 Spst-Chr5 50058033 50058887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01568 17 281 Nicotianamine Synthase Gene Family AT5G56080 49.814 8.58e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01568 K05953 - gmx:100819726 497.278