Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01566 ATGAAGTCCAAGGGATTCCAATGGAGTGATGCACTGGAGTTTGTGGACACCCCTAAAGAGGGAATAGCGGTGAGAGCTTTGTGCGAGTTGAAGGAAGGTGATGTTATGCCCAAAATGCCAAAGGAAGCTTGCCTCACCACCAAGACTAGTGGGGCACGTGAGATCATGGAAGAGGCTGGTTTGGATGGTCATTTGGGGCTAGCATTTGCTGTCATGTATGAGACAAGCTTGGGTGGGGGGGGGGGACTCTCCCCTTGGAATGGATACCTTCAACTCTTGCCTTACCAAGAGTGCGTGATTGTTTGGAGCCTCAATGAAGTAAACGAGCTTTTGTTTGGTATTGTTCAGCTTAATAATCATGGAGGATGTTTTTGGTTTATTGGTTGA 387 0.4755 MKSKGFQWSDALEFVDTPKEGIAVRALCELKEGDVMPKMPKEACLTTKTSGAREIMEEAGLDGHLGLAFAVMYETSLGGGGGLSPWNGYLQLLPYQECVIVWSLNEVNELLFGIVQLNNHGGCFWFIG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01566 128 Gene3D set domain protein methyltransferase, domain 1 1 119 - -
Spst5g01566 128 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 111 - -
Spst5g01566 128 SUPERFAMILY SET domain 2 111 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01566 Spst-Chr5 50010738 50011124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01566 1 113 NAC Transcription Factor Family AT3G56570 55.263 7.86e-36 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01566 - K05302 pvu:PHAVU_007G114400g 190.66