Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01564 ATGTCTCACTACAAAGGTGGAAGTGCAGTGCTACTTGTTGTTATTGCTTCAGTTTCAGGAAATGTAGATGCCAGTGGAAACGGCTTGAAAGAAGCTGCTCTAGCAGTGAGTTTGTTATTGCCAGTGATGAAAATTATGGCAATAAGCAGTGACTGCACTTCAGATTCTAAGGCAATTGCGACAGGAGACAGCCTCTATGCGTGGAAGTCAAATGCAGTGTTTAGATATCCTGTCTGGTATCAAGTATCCCCTGATCAGGCACAGCTGCTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGCGTTTATACTGGATACTCATCACTAGCCATAGCATTGGTTCTGCCAGAATCAGGTCATTTGGTTGCATGTGAAAGAGATTGCAAATCTCTTGATGTTGCCAAAAAGTATTATCAGCTAGCTGGTGTTTCCCATAAGGTGGAAGTAAAACTTGGACTTGCAATGGATTCCCTAGAATCTTTAATTCAGAATGGTGAAGCTGGAAGGAGCTCTTCCACATTTCTTTGGTTGAGTTCAAATGAGAAAAACCTGGCGCTGCCTTACCCTCAGGTTTCCTTTTGTGGAGTTTTAGCTGCTCTGGGTTTTAAACCTAATGGGAGTTTGTGTTACTCTATGATTCCTTCCTGGTCAGTAGTGATCGGCTATGATTTTGCATTTATTGATGCCGAGAAAAGAATGAACGAGAAATATTTTGAACTGCTGCTGCAGCTGGTGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGACCCTTTGGTATATGACCCTAAAACTATCAGCATTAGAAATTTTAACCAAAAGTTAATGGAAGATGAGCGTGTAAGCATTAGTATGGTACCTATTGGAGACGGGATGACAATCTGCCGAAAAAGTTGA 933 0.418 MSHYKGGSAVLLVVIASVSGNVDASGNGLKEAALAVSLLLPVMKIMAISSDCTSDSKAIATGDSLYAWKSNAVFRYPVWYQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGHLVACERDCKSLDVAKKYYQLAGVSHKVEVKLGLAMDSLESLIQNGEAGRSSSTFLWLSSNEKNLALPYPQVSFCGVLAALGFKPNGSLCYSMIPSWSVVIGYDFAFIDAEKRMNEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVYDPKTISIRNFNQKLMEDERVSISMVPIGDGMTICRKS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01564 310 Gene3D Vaccinia Virus protein VP39 54 310 IPR029063 -
Spst5g01564 310 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 309 IPR029063 -
Spst5g01564 310 Pfam O-methyltransferase 80 173 IPR002935 GO:0008171
Spst5g01564 310 Pfam O-methyltransferase 226 309 IPR002935 GO:0008171
Spst5g01564 310 PANTHER O-METHYLTRANSFERASE-RELATED 227 309 - -
Spst5g01564 310 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 38 310 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01564 Spst-Chr5 49994269 49996990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01564 81 298 Monolignol Biosynthesis Gene Families AT3G62000 61.009 2.65e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01564 - - gsj:114386245 305.834