Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01553 ATGGGAATTGTGAAGATTCTAGCATGGCTGATTGCTATTGGCCAGTTAATTTTCGACTGGTTTCCTATCATTGGACCGTTCGGGAAGCCGGCGAAGCGAGACACAGCGTTGCACGTGCAGATGAAATTCACGCTGGTGGAGGAGAATTTGCTTTACCAGCGAGGCATTGCAACGGATCCGGAGCACTGCGAAGTGAGGAACACGTATTTTCCAGTGAGAAAGGGGAGTTCAGTAAGGTTGTATCAAGATGCGCAATGTCCCGAATCTAGCAAAGGGAAGTTACCTGAGGTAAAGCTTGAGAATGGAGAGGTTTATAGGCACGGGAAGTGTTGGGAGGGTATTTGTTATGCCATATCTGAGGCTCATCACATGGTGTATTTGGTGGGTTGGTCGATTTCCCACAAGGTGAAGCTTGTTAGAGAGCCTACTAGGACGTTCCCACGAGGTGATTTGACGCTTGGAGAGTTGCTGAAGTGTAAGTCTGAAGAAGGGATGAGAGTGTTGTTGCTAGTTTGGGATGATAAAACTTCGCACGATAAGATTTTACTCAAGACGGTTAGGATTTTACGTTCTTTCCTTTTTGTAATCGGTCGGAATGCTTGA 603 0.4643 MGIVKILAWLIAIGQLIFDWFPIIGPFGKPAKRDTALHVQMKFTLVEENLLYQRGIATDPEHCEVRNTYFPVRKGSSVRLYQDAQCPESSKGKLPEVKLENGEVYRHGKCWEGICYAISEAHHMVYLVGWSISHKVKLVREPTRTFPRGDLTLGELLKCKSEEGMRVLLLVWDDKTSHDKILLKTVRILRSFLFVIGRNA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01553 200 PANTHER PHOSPHOLIPASE D 2 184 IPR015679 -
Spst5g01553 200 SUPERFAMILY Phospholipase D/nuclease 64 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01553 Spst-Chr5 49154142 49154744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01553 1 189 Phospholipase D Gene Family (Wang group) AT4G35790 60.317 8.04e-70 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01553 K01115 - gmx:100814486 298.901