Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01523 ATGACCGAAGAAGACAAACCCAAAGCCTCATCCGTCGACCACCACCACCATCATCACCACCCCCCTCCGCCGCAGCCACTACCCTATCCACCCCCCCAGTATGGCACCTTCCAAGGGGTCGCCAACTACCCTCCTCCGCCGGAGCCACACCCCGCTATCGGGTTTCCCCACCCTGTTCCCCCGCCCGGTGCGATTGACTCCTCTGCCCCTCCTCCGCCGTACTACCAGGGCTACCAAGCAGTTCCCGGTTACGCAGTTGCTGAAGGAAGACCTGTAAGGGAACGCCACCTTGGTTGCTGTGGCCTTGGTTGTGGCTGGTGTCTGTTTATACTAGGCTTCTTTCTTGCTGCTATTCCATGGTACGTTGGGGCAATAATTATGCTTTGTTCCAGAGTAGACCACCGAGAGAAACCTGGTTATGTTGCTTGTGTAGTTGCTGCTATTCTGGGTACAATCGCTATTATTCTTGGTGTGACAAAGGGAGTACATGAGTGGTAA 498 0.5522 MTEEDKPKASSVDHHHHHHHPPPPQPLPYPPPQYGTFQGVANYPPPPEPHPAIGFPHPVPPPGAIDSSAPPPPYYQGYQAVPGYAVAEGRPVRERHLGCCGLGCGWCLFILGFFLAAIPWYVGAIIMLCSRVDHREKPGYVACVVAAILGTIAIILGVTKGVHEW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01523 165 MobiDBLite consensus disorder prediction 42 69 - -
Spst5g01523 165 MobiDBLite consensus disorder prediction 1 73 - -
Spst5g01523 165 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 165 IPR044804 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01523 Spst-Chr5 48094076 48097145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01523 3 165 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 34.123 1.62e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01523 - - gmx:100810998 237.654