Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01518 ATGGGGGTATCTCTATCTCCCAAAACAGCAACATGGTGTCTCATGTTGGTGCCTGTGCTGCTGCTGTGGCTGTGGAAGCTGGTGAACTGGGTGTGGCTGAGGCCAAAGAGAATGGAGAAGCTTCTCAGAGCACAGGGTCTTCAGGGCAATCCCTACAGGCTCCTAGTTGGAGACACAAGGGAAATGTTTACAGTGCTCATGCAAGCTGCAAAATCTCAACAATCCGTGACCTTTCCCTCCAATGACAAGGACGTCGCACCGCATATCACAACCTTTAACCATCATATTGTCCACAAATTCGGCAAAAATTCATTTGTATGGGAAGGTCCAACACCAAAAGTGATCATCATGAATCCTGAGCAAATCAAAGAAGTCTTCAACAAGATCCAAGACTTTGAGAAGCCCAAGTTGAGTCCCACTGTCAAATTGTTGGGTTCTGGACTTGCAAATTTAGAAGGGGATAAATGGAAGATGCATAGAAAGATTATCAACCCTGCTTTCCATTTAGAAAAACTGAAGGCTATGTTACCCATATTTTTTGAATCTTGCGATGATATGATTTCCAAATGGGAAGCCATGCTCTCTTCAGAGGAGAAATGTGAAATTGACGTATGGCCTTTCGTTAAAAATTTGACCTGTGATATTATTTCGAGAACAGCATTTGGAAGCAGTTATGAAGAAGGCAGAAAAATATTTGAACTTCTGCAAGAGCAAGCTGGACTTATCATGAGATTACGAACAGCTTACATTCCAGGGTCGTGGTTGTTACCAACAGCTAGAAATAGGAGGATGAAAGAAATTGATACCAACATACGAGGATTACTTAAAGGTATCATAAACAATCGAGAGAAAGCAATGAAGGCCGGTGAAGTTTTAAACAATGACTTACTGGGGATACTTTTGGAATCAAACCATGCTGAAATGCTAGAAAATAACAGTAAGACCCTTGCAATGACTAGTCAAGAAGTAATTGAGGAGTGCAATGCGTTCTACATAGCAGGGCAAGAAACTACAGCGGTTTTACTGCTTTGGACAATGGTGTTGTTGGGTAGGCATCCTAAGTGGCAAGCACGTGCTAGAGAGGAAGTGTTGCAGGTTTTTGGTAAGCAAAAGCCAGACTATAATGGGCTAAGTCACCTCAAAGTTGTGACCATGATTTTATACGAGGTTCTCAGGTTATATCCACCTTTAGTTTATTTCAGTCGATGTACCAAGAATGATGTCAAACTTGGAGACCTTTCTCTACCTGCAGGAGTGCAAGTTTCCATGCCAATATTGTTGATTCACCAGGATCGTGATATCTGGGGTGAAGATGCTACTGAGTTCAAACCAGAAAGATTTGCTGAAGGAGTGGCAAAAGCAACAAAAGGCCAAGTTTCATTTTTCCCATTTGGAGGTGGTCCCAGAGTGTGCATTGGCCAAAATTTTGCTCTACTTGAAGCAAAGATGATTTTGTCTTTACTTTTGCAACGTTTCTCGTTTGAGATTTCTCCAACCTATGCACATGCTCCAGTCACTGTGTTCACTCTTCATCCAAAACATGGGGCTCATATCATCTTACACAAGCTTTAG 1572 0.4198 MGVSLSPKTATWCLMLVPVLLLWLWKLVNWVWLRPKRMEKLLRAQGLQGNPYRLLVGDTREMFTVLMQAAKSQQSVTFPSNDKDVAPHITTFNHHIVHKFGKNSFVWEGPTPKVIIMNPEQIKEVFNKIQDFEKPKLSPTVKLLGSGLANLEGDKWKMHRKIINPAFHLEKLKAMLPIFFESCDDMISKWEAMLSSEEKCEIDVWPFVKNLTCDIISRTAFGSSYEEGRKIFELLQEQAGLIMRLRTAYIPGSWLLPTARNRRMKEIDTNIRGLLKGIINNREKAMKAGEVLNNDLLGILLESNHAEMLENNSKTLAMTSQEVIEECNAFYIAGQETTAVLLLWTMVLLGRHPKWQARAREEVLQVFGKQKPDYNGLSHLKVVTMILYEVLRLYPPLVYFSRCTKNDVKLGDLSLPAGVQVSMPILLIHQDRDIWGEDATEFKPERFAEGVAKATKGQVSFFPFGGGPRVCIGQNFALLEAKMILSLLLQRFSFEISPTYAHAPVTVFTLHPKHGAHIILHKL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01518 523 FunFam Cytochrome P450 734A1 32 523 - -
Spst5g01518 523 Pfam Cytochrome P450 94 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 SUPERFAMILY Cytochrome P450 88 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS E-class P450 group I signature 97 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 Gene3D Cytochrome P450 31 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 516 - -
Spst5g01518 523 CDD CYP72 92 519 - -
Spst5g01518 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Spst5g01518 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01518 523 PRINTS P450 superfamily signature 385 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01518 Spst-Chr5 48055271 48058020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01518 16 523 Cytochrome P450 AT3G14630 55.577 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01518 - K17873 gmx:100781923 841.262