Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01517 ATGGAAGCAGCACGGGCCATAACTCTGACTCTCATACTGATACTTGTTCTGATATGGGCATGGAGGATTCTGAGTAGGTTATGGTTCACACCCAAAAGACTTGAAAAGCTTCTAAGAGAGCAAGGGTTTCAAGGCAATCCATACAAGGTTTTGGTTGGAGACAGCAAGGAGTTTCTGAAGATGAGGGAGGAAGCCTTATCCAAACCCATGAATCTCTCGGATGACATAGTGCCACGTGTGGAACCCTATCTCCATCATAGTGTCAACACACATGGCAAGAATTCTTTTATCTGGTTAGGGCCAACGCCAAGGGTGACCATCTTAGATCCCGAGCAAATCAAAGATGTATTTAACAAGATGTCTGACTTTCCAAAGCCTGATACAAATCCACTTGTCAAGCTATTGGCAACCGGTGTTGCAGGTTATGAAGGAGAAAAGTGGAGCAAGCACAGAAGATTAATCAACCCTGCTTTCAATTTAGAAAAACTGAAGACTATGCTACCACTATTTTTCAAAAGTTGCAATGACCTGATTAGCAAATGGGAGGGGATGTTGTCTCCAGACGGATCATGTGAAATAGATGTTTGGCCTTTTCTTCAAAATCTGACCAGTGATGTTATTGCTAGATCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGTTAAACTTCTAACGCAGGTTATATTAAAAATTCAAATCCCCGGATGGAGGTTTTTACCTACTAAAACACATAGGAGGATGAAGGAAATTGACAGAGATATAAAAGCTTCACTCAAGGATATGATTTACAAGAGGGAGAAAGCACAAAAGGCAGGTGAAGCCACTAATAATGACCTATTAGGTATACTTTTGGAGTCCAATCACAGGGAAATCCAAGAACATGGAAACAAAAACTCTAAGAATGTTGGAATGAGTCTTGAAGATGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAGGAAACCACTTCAGTTTTGTTGGTTTGGACAATGGTGTTATTGAGTAGGTACCCTTATTGGCAAGAACGTGCAAGAGAGGAAGTCTTTCAAGTCTTTGGCAATGAAAAGCTAGATTTTGATGGTTTAAGTCGCCTAAAGATTGTAAGTATTGTCACTATGATTTTGTATGAGGTTCTTAGATTATACCCACCAGCACTTGGGATGGCTCGACTTGTTAAAAAGGATTTGAAACTTGGAAACTCTACATTACCTGCTGGAGTGCATGTGTTCCTCCCAACAATTTTGGTTCAGCATGAGTGTGAATTATGGGGAGAAGATGCTAAGCAGTTCAATCCTGAGAGATTTTCCGAAGGAGTTGTAAAAGCAACAAAGGGTAGAGTTTCATTCTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCCATGTTGGAAGCAAAGATGGCCTTGTCAATGATTTTACAGCATTTCTCATTCGAACTCTCTCCTGCATATGCTCATGCTCCAACTATGTCAATTACTCTTCAGCCACAGTTCGGTGCTCATATCATTCTACATAGATATGAAAGAAAATAG 1575 0.4032 MEAARAITLTLILILVLIWAWRILSRLWFTPKRLEKLLREQGFQGNPYKVLVGDSKEFLKMREEALSKPMNLSDDIVPRVEPYLHHSVNTHGKNSFIWLGPTPRVTILDPEQIKDVFNKMSDFPKPDTNPLVKLLATGVAGYEGEKWSKHRRLINPAFNLEKLKTMLPLFFKSCNDLISKWEGMLSPDGSCEIDVWPFLQNLTSDVIARSAFGSSFEEGRRIFQLQREQVKLLTQVILKIQIPGWRFLPTKTHRRMKEIDRDIKASLKDMIYKREKAQKAGEATNNDLLGILLESNHREIQEHGNKNSKNVGMSLEDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPYWQERAREEVFQVFGNEKLDFDGLSRLKIVSIVTMILYEVLRLYPPALGMARLVKKDLKLGNSTLPAGVHVFLPTILVQHECELWGEDAKQFNPERFSEGVVKATKGRVSFFPFGWGPRICIGQNFSMLEAKMALSMILQHFSFELSPAYAHAPTMSITLQPQFGAHIILHRYERK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01517 524 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 FunFam Cytochrome P450 734A1 28 522 - -
Spst5g01517 524 CDD CYP72 82 517 - -
Spst5g01517 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Spst5g01517 524 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 514 - -
Spst5g01517 524 Gene3D Cytochrome P450 28 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 Pfam Cytochrome P450 89 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01517 524 SUPERFAMILY Cytochrome P450 79 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01517 Spst-Chr5 48034331 48037526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01517 6 520 Cytochrome P450 AT3G14690 57.171 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01517 - K23809 gmx:100808323 879.396