Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01516 ATGGAAGCAGCACGGGCCATAACTCTGACTCTCATACTGATACTTGTTCTGATATGGGCTTGGAGGATTCTGAGCTGGTTATGGTTCACACCCAAAAGACTTGAAAAGCTTCTAAGAGAGCAAGGGTTTCAAGGCAATCCATACAAGGTTTTCGTTGGAGACAGCATAGAGTTTCTGAAGATGAGGGAGGAAGCCTTATCCAAACCCATGAGTCTCTCGGATGACATAGTGCCACGTGTGGAACCCTATCTCCATCATAGTGTCAACACGCATGGTAGGAATTCTTTTATCTGGTTAGGGCTAAAGCCAAGAGTGACCATCTTGGATCCGGAGCAAATCAAAGATGTCTTTAACAAGATGAATGACTTTCAAAAACCTGATGCAAATCCACTTGTCAAGTTACTGGCATCAGGCCTTGCAGGCTATGAGGGAGAAAAGTGGCGCAAGCACAGACGGTTAATCAACCCTGCTTTCAATTTAGAAAAACTGAAGAATACGTTACCATTATTCTTCCAAAGTTGCACTGATCTGGTTAGCAAATGGGAAAGAATGTTGTCTCCAGACGGATCATGTGAAATAGATGCATGGCCTTTCCTTCAGAATCTGACTAGTGATGTTGTCGCTCGATCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAATCTCCTGATACAAGATCTCTTTAAAGTTACAATCCCTGGATGGAGGTTTATACCTACTAAAACACATAGGAGGATGAAGGAAATTGACGGAGATATAAAAGCTTCACTCAAGGATATGATTTACAAGAGGGAGAAAGCACTAAAGGCAGGTGAAGCCACTAATAATGACCTATTAGGTATACTTTTGGAGTCCAATCACAGGGAAATCCAAGAACATGGAAACAAAAACTCTAAGAATGTTGGAATGAGTCTTGAAGATGTAATCGAGGAATGCAAGGTATTCTACTTTGCAGGGCAGGAAACCACTTCAGTTTTGTTGGTTTGGACAATGGTGTTATTGAGTAGGTATCCTTATTGGCAAGAACGTGCAAGAGAGGAAGTCTTTCAGGTCTTTGCCAATGAAAAGCCAAATTTTGATGTTTTAAGTCGCTTAAAGATTGTCACAATGATTTTGAATGAGGTTCTTAGATTATACCCACCAGCAACTGGGATAACTCGACTTGTTAAAAAGGACTTGAAGCTTGGAAACTCTACATTACCTGCTGGAGTGCATGTGTTCCTCCCAACAATTTTGGTTCAGCATGAGTGTGAATTATGGGGAGAAGATGCTAAGCAGTTCAATCCTGAGAGATTTTCCGAAGGAGTTGTAAAAGCAACAAAGGGTAGAGTTTCTTTCTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCCATGTTGGAAGCAAAGATGGCCTTGTCAATGATTTTACAACATTTCTCGTTCGAACTTTCTCCAGCATATGCTCATGCTCCAGCCTTGTCAATTACTCTTCAACCACAGTATGGAGCTCATATCATTCTACGTAGATATGAAAGAAAATAG 1566 0.4093 MEAARAITLTLILILVLIWAWRILSWLWFTPKRLEKLLREQGFQGNPYKVFVGDSIEFLKMREEALSKPMSLSDDIVPRVEPYLHHSVNTHGRNSFIWLGLKPRVTILDPEQIKDVFNKMNDFQKPDANPLVKLLASGLAGYEGEKWRKHRRLINPAFNLEKLKNTLPLFFQSCTDLVSKWERMLSPDGSCEIDAWPFLQNLTSDVVARSAFGSSFEEGRRIFQLQREQANLLIQDLFKVTIPGWRFIPTKTHRRMKEIDGDIKASLKDMIYKREKALKAGEATNNDLLGILLESNHREIQEHGNKNSKNVGMSLEDVIEECKVFYFAGQETTSVLLVWTMVLLSRYPYWQERAREEVFQVFANEKPNFDVLSRLKIVTMILNEVLRLYPPATGITRLVKKDLKLGNSTLPAGVHVFLPTILVQHECELWGEDAKQFNPERFSEGVVKATKGRVSFFPFGWGPRICIGQNFSMLEAKMALSMILQHFSFELSPAYAHAPALSITLQPQYGAHIILRRYERK 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01516 521 FunFam Cytochrome P450 734A1 28 519 - -
Spst5g01516 521 Pfam Cytochrome P450 90 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 CDD CYP72 82 514 - -
Spst5g01516 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Spst5g01516 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 511 - -
Spst5g01516 521 SUPERFAMILY Cytochrome P450 79 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01516 521 Gene3D Cytochrome P450 78 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01516 Spst-Chr5 47986522 47989998 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01516 6 517 Cytochrome P450 AT3G14690 56.725 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01516 - K23809 gmx:100808323 857.44