Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01515 ATGGAAGCAGCACGGGCCATAACTCTAACTCTGATACTGATACTTGTTCTGATATGGGCATGGAGGATTCTGAGCTGGTTATGGTTCACACCCAAAAGACTTGAAAAGCTGCTAAGAGAACAAGGGTTTCGGGGCAATCCGTACAAGGTTTTGGTTGGAGACAGCAAGGAGTTTCTGAAGATGAGGAAAGAAGCCTTATCCAAACCCATGAATCTATCGGATGACATAGTACCACGTGTGAATTCCTATCTCCATCGTAGTGTCAGCGCACATGGTAAGAATTCTTTTATCTGGTTAGGACCAACGCCAAGAGTGACCATCATGGATCCGGAGCAAATCAAAGATGTATTTAACAAAATGAATGACTTTCCAAAACCTGATGCAAATCCACTTGTGAAGTTACTGGCAACAGGCCTTGCAGGCTATGAAGGAGAAAAGTGGAGCAAGCACAGAAGGTTAATCAACCCTGCTTTCAATTTAGAAAAACTGAAGACTATGTTACCATTATTCTTCGAAAGTTGCATTGATCTGGTTGGCAAATGGGAAGGAATGTTATCTTCGGACGGATCATGTGAAATAGATGCATGGCCTTTCCTTCAGAATCTAGCTAGTGATGTTATCGCTCGATCAGCATTTGGAAGTAGCTTTGAAGAAGGAAGAAGAATATTTCAACTTCAAAGAGAGCAAGCTAAACTCGTAATGGAATTTCTCTTAAAAATTCAAATCCCTGGATGGAGGTTTTTACCTACAAAAACTCACAGGAGGATGAAGGAAATTGACAGAGACATAAAAGCTTCACTTAAGGATATGATTTACAAGAGAGAAAAAGCACTAAAGGTGGGTGAAGCCACTAATAATGACCTATTAGGTATACTTTTGGAGTCCAATCAGAGGGAAATTCAAGAACATGGAAGCAAAAAAAATAAGAATGTCGGAATGAGTCTTAAAGATGTAATCGAGGAATGCAAGTTATTCTACTTTGCAGGACAGGAAACCACTTCAGTTTTGCTGGTTTGGACAATGGTGTTACTGAGTAGATACCCTACTTGGCAGGAACGTGCAAGGGAGGAAGTCTTGCAAGTATTTGGGAATCAAAAGCCAAATTTTGATGGTTTAAGTCGCCTGAAGATTGTCACCATGATTTTCCATGAGGTTCTTAGATTGTACCCTCCAGCACTTGGGATGGTTCGACTTGTTAAAAAAGATTTGAAACTTGGAAACTTTACATTACCTGCTGGAGTGGAGGTTTTACTCCCAACTGATTTGGTTCACCGTGAGTGTGAATTATGGGGAGAAGATGCTAAGCAGTTCAATCCTGAGAGATTTTCGGAAGGAGTTGTAAAAGCAACAAAGGGTAGAGTTTCATTCTTTCCATTTGGATGGGGTCCTAGAATATGCATTGGACAAAACTTCTCCATGTTGGAAGCAAAGATGGCTTTGTCAATGATTTTACAGCATTTCTCATTCGAACTCTCTCCTGCATATGCTCATGCTCCAACTATGTCAATTACTCTTCAGCCACAGTTCGGTGCTCATATCATTCTACATAAAGTGAAGATGTGA 1563 0.4056 MEAARAITLTLILILVLIWAWRILSWLWFTPKRLEKLLREQGFRGNPYKVLVGDSKEFLKMRKEALSKPMNLSDDIVPRVNSYLHRSVSAHGKNSFIWLGPTPRVTIMDPEQIKDVFNKMNDFPKPDANPLVKLLATGLAGYEGEKWSKHRRLINPAFNLEKLKTMLPLFFESCIDLVGKWEGMLSSDGSCEIDAWPFLQNLASDVIARSAFGSSFEEGRRIFQLQREQAKLVMEFLLKIQIPGWRFLPTKTHRRMKEIDRDIKASLKDMIYKREKALKVGEATNNDLLGILLESNQREIQEHGSKKNKNVGMSLKDVIEECKLFYFAGQETTSVLLVWTMVLLSRYPTWQERAREEVLQVFGNQKPNFDGLSRLKIVTMIFHEVLRLYPPALGMVRLVKKDLKLGNFTLPAGVEVLLPTDLVHRECELWGEDAKQFNPERFSEGVVKATKGRVSFFPFGWGPRICIGQNFSMLEAKMALSMILQHFSFELSPAYAHAPTMSITLQPQFGAHIILHKVKM 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01515 520 Pfam Cytochrome P450 90 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 CDD CYP72 81 514 - -
Spst5g01515 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 SUPERFAMILY Cytochrome P450 80 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 Gene3D Cytochrome P450 17 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 511 - -
Spst5g01515 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Spst5g01515 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01515 520 FunFam Cytochrome P450 734A1 28 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01515 Spst-Chr5 47892623 47896480 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01515 6 518 Cytochrome P450 AT3G14690 55.837 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01515 - - gmx:100808323 877.856