Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01513 ATGGTTATGTTCACGTGTAGGTTTCTGCCTTCTCCTCTTAAGAGAAGGATTAAGGAAATTAGTAGAGACATACGAGCTTCACTCTCGGATATGATTGAAAAGAGAGAGAAGGCACTAAAGGGGGGTGAAGCCCCTAAAGACAACTTGTTAGATACACTTCTGGAGTCGAATCGGAAGGAAATTGAAGAACATGGAAAAAATAAGAAGGTTGGAATGACTATTGAGGATGTTATGGACGAATGCAAGCTCTTCTACGTAGCAGGACAAGAGACGACTGCATCTTTGCTTGTTTGGACAATGATAGTGCTGAGTATGTACCCTGATTGGCAAGCACGTGCAAGAGAAGAAGTATTGAAAGTTTATAGCAACCGAAAACCAGATTTTGATGGACTGCACCACCTTAAGATTGTAAGTTTCTATCATGGTACACTATTTTTCAACACATTTACATACAATTATATGTTTTCCATTTTTTCGCAACAGACCACCATGATTTTCTACGAGGTTCTTAGGTTGTACCCACCGATAGTTGTTTTTCATCGACAAGTTCACAAAGATGTGAAACTTGGAAACCTCTCATTACCTGCTGGAGTGAAGATTGCCTTGCCATTGGTTATGGTTCACAATGATTGTAAACTCTGGGGTGATGATGCTAAGGAGTTCAAACCAGAGAGATTTTCTGCAGGACTTCTGAAGGCCACAAATGGAAAAGCTTCATTCTTCCCCTTTGGAGGAGGTCCAAGAATATGCTTAGGACAAAACTTTACCTTGTTGGAAGCAAAGGTTACTTTGTCGATGATTTTACAACGTTTCTCGGTTGAACTTTCTCCAACCTATGTTCATGCTCCATGTTCCGTGATTTCTCTTCAGCCCCAATATGGTGCTCATGTCATTCTACGTAAGGTTGAAAATAAAAAATACTAA 924 0.4004 MVMFTCRFLPSPLKRRIKEISRDIRASLSDMIEKREKALKGGEAPKDNLLDTLLESNRKEIEEHGKNKKVGMTIEDVMDECKLFYVAGQETTASLLVWTMIVLSMYPDWQARAREEVLKVYSNRKPDFDGLHHLKIVSFYHGTLFFNTFTYNYMFSIFSQQTTMIFYEVLRLYPPIVVFHRQVHKDVKLGNLSLPAGVKIALPLVMVHNDCKLWGDDAKEFKPERFSAGLLKATNGKASFFPFGGGPRICLGQNFTLLEAKVTLSMILQRFSVELSPTYVHAPCSVISLQPQYGAHVILRKVENKKY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01513 307 PANTHER CYTOCHROME P450 FAMILY MEMBER 6 295 - -
Spst5g01513 307 Pfam Cytochrome P450 162 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 Pfam Cytochrome P450 5 136 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS E-class P450 group I signature 240 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS E-class P450 group I signature 76 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS E-class P450 group I signature 250 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS E-class P450 group I signature 96 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 243 252 IPR017972 GO:0005506|GO:0016705
Spst5g01513 307 PRINTS P450 superfamily signature 250 261 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS P450 superfamily signature 87 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS P450 superfamily signature 241 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 PRINTS P450 superfamily signature 164 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 Gene3D Cytochrome P450 1 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01513 307 SUPERFAMILY Cytochrome P450 6 300 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01513 Spst-Chr5 47873799 47874722 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01513 8 302 Cytochrome P450 AT3G14680 53.898 2.24e-112 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01513 - - gmx:100782454 405.601