Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01480 ATGGAAGAGGAAGGCACGGATTTGCGAAAGCAAGCGAGGCTCGCCATCATGGAACTCGCCAACATGATAAGCGTTCCGATGGCCCTAAACGCCGTCGTTCGCCTCAACGTCGCCGACGCCATCTGGAACGCCGGCGCCAACGCACCACTCTCAGCCGCCCAGATCCTCCCCCGCCTCCTCCCGGCCGGCGTTGGCGACGCCGAGAACCTCCAGCGCCTCCTCCGCATCCTCACCAGCTACGGCGTCTTCCGCGAGCACCTCGCCGACGGCGAACGCAAGTACTCCCTCACCGACGTCGGCAAAACGCTCGTCACCGATGAGCAAGGTCTCTCCTACGGGGCTTACGTGCTCCAACACCACCAGGATGCGTTGATGAGGGCGTGGCAGTTGGTGCACGAGGCAGTGGTAGACCCTACGAAGGAGCCCTTCGAGAGGGCGAACGGAGAGGGAGCGTACGGGTACTACCTGAAGCAACCAGAGATGAACGAGCTAATGTTGAGGGCCATGGCAGGGGTGTCAGTGCCCTTCATGACGGCCATGTTGGAGGGCTACGATGGCTTCCAGGGTGTGGAGAGGCTCGTCGACGTCGGCGGTAGTGGCGGTGACTGCCTCCGCATGATCTTGCACAAACACCCCACCATCAAAGAAGGGATCAACTTCGACCTCCCCGAAGTTGTTGCCAAAGCACCACCAACTCGATGTGTCAGCCATGTGGGTGGTGACATGTTCAAATCTATTCCCCAAGGAGATGCTATCTTTATGAAGTGGGTGCTAACAACATGGACGGACGAGGAAATAAAGCAGATAATGCAGAACTGTCACAAGGCACTTCCTGAGGGAGGGAAACTAATAGCTTGTGAGCCAGTGCTGCCAGAGCACTCAGATGAGACTCACAGAACAAGGGCGTTGCTTGAGGGTGACATTTTTGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAAGAACAGTTCAGACAGTTAGCCGTTGATGCAGGTTTCCCACGTTTCAGAGCCTTCCATGTTGACCATTTCTACACTATCCTTGAGTTTCAGAAATGA 1065 0.5643 MEEEGTDLRKQARLAIMELANMISVPMALNAVVRLNVADAIWNAGANAPLSAAQILPRLLPAGVGDAENLQRLLRILTSYGVFREHLADGERKYSLTDVGKTLVTDEQGLSYGAYVLQHHQDALMRAWQLVHEAVVDPTKEPFERANGEGAYGYYLKQPEMNELMLRAMAGVSVPFMTAMLEGYDGFQGVERLVDVGGSGGDCLRMILHKHPTIKEGINFDLPEVVAKAPPTRCVSHVGGDMFKSIPQGDAIFMKWVLTTWTDEEIKQIMQNCHKALPEGGKLIACEPVLPEHSDETHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLAVDAGFPRFRAFHVDHFYTILEFQK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01480 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Spst5g01480 354 PANTHER O-METHYLTRANSFERASE 17 341 IPR016461 GO:0008168
Spst5g01480 354 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
Spst5g01480 354 Gene3D - 2 107 IPR036388 -
Spst5g01480 354 Gene3D Vaccinia Virus protein VP39 108 354 IPR029063 -
Spst5g01480 354 FunFam Caffeic acid 3-O-methyltransferase 109 354 - -
Spst5g01480 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 106 IPR036390 -
Spst5g01480 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Spst5g01480 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01480 Spst-Chr5 45953995 45958201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01480 1 354 Monolignol Biosynthesis Gene Families AT3G53140 73.538 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01480 - - gmx:100784957 639.032