Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01475 GATATTAAAGAGTTAGAGTTTTTCACTGAGTATGGGGATGCCAACAGATACAAGATTCTTAAAGTTGTTGGGAAGGGTAGCTATGGAGTTGTTTGTTCAGCAATTGATACACACACCGGGGGAAAGGTTGCAATAAAGAAGATTCATGACATTTTTGAACATATCTCTGATGCCATTAGAATCCTCAGAGAAGTCAAGTTGCTTAGACTTTTGAGACACCCTGATATTGTTGATATTAAGCGAATCATGTTGCCGCCTTCAAAGAGGGAGTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAGTCTGATCTCCATCAGGTCATCAAAGCTAATGACGACTTGACCCGTGAACACCATCAGTTTTTTCTTTATCAGATGCTACGTGCATTGAAGTATATGCATACAGCTAATGTATATCATAGAGACCTTAAACCCAAGAATATACTGGCAAATGCAAACTGCAAACTGAAAGTTTGTGATTTTGGATTGGCTAGAGTTGCATTTAATGATGCACCAACAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTACAGAGCCCCAGAACTATGTGGTTCCTTCTTTTCAAAGTATACACCGGCAATTGATATATGGAGCATTGGATGCATTTTTGCAGAGGTGTTGACAGGAAAGCCACTGTTTCCTGGAAAAAGTGTTGTGCATCAATTAGATTTGATTACCGATCTTCTTGGGACACCATCACCTGAAACTATTGCAGGAGTTCGGAATGACAAGGCAAGGAAGTACCTGATGGAAATGCGGAAAAAATCCCCTGTGCCATTTGAACAGAAATTTCCAAATGCAGATCCATTGGCACTTCGTCTACTGCAAAGGCTTTTAGCATTTGATCCAAAGGATCGGCCAACTGCTCAAGAGGCACTATCTGATCCCTTCTTTAAGGGTTTGGCGAAAGTTGAGAGGGAACCTTCATGTCAGCCAATTTCAAGGTTAGAATTTGAGTTTGAGAGGAGACGGGTGACAAAGGAGGATGTTAGAGAACTAATATATCGGGAAATACTGGAATATCATCCCCAATTGCTGAAAGATTACATGAGTGGAACTGAAGGCACTCACTTCCTTTACCCTAGTGCAATAGATCAATTCAGAAAGCAATTTGCTTATCTTGAGGAAAATCATGGTAAAAGTGGTCCAGTGATTCCTCCAGAAAGGAAGCATGTTTCCCTTCCAAGATCCACTGTTCACTGTAGTACAATTTCTCCTAGTACACAGCCATCTTTTGCATCATACGAGAACAAGCAAATGGCGGCAGAGGCATCAAAGATTTCGAGATCAGTAGAATCAAATTCTGGAAGTCAATTAAGGAGTTCACGACCCCCGCCAAGAGTGCCAGCAGCCAAACCAGGTCGAATAGTAGGGCCAGTTTTGCACTATGACAATGGGAGAACCATAAAAGATGCTTATGACCAAAGGATCTTCTACCGAAACACGCTTCCTCAAGCAGTCTCCCCACACTGTTTCCATAGGGTGCAACCAACTAACACAAAATCCACATCAGAAACATACAAGGATATTTCACAAGGCAAACATCAACTCCCGTCCCAGCAGTGTAGCATGCCAGCCAGACCAGCAATTGATCTCAACACTAATCCATACTATCAACAGGGGAAGAGAGACCACTCAAATGATCCTGTTGCTTCTATTGATGCAAAACTGCTGCAGGCACAGTCTCAATTTGGTGCAGTTGGTGCTGCAGCGGTAGCTGTTGCTGCTCATAGGCATTCAGGGAGCTTTCACTATGGATTGTCATAG 1797 0.4218 DIKELEFFTEYGDANRYKILKVVGKGSYGVVCSAIDTHTGGKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVDIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPTTTFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAGVRNDKARKYLMEMRKKSPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAQEALSDPFFKGLAKVEREPSCQPISRLEFEFERRRVTKEDVRELIYREILEYHPQLLKDYMSGTEGTHFLYPSAIDQFRKQFAYLEENHGKSGPVIPPERKHVSLPRSTVHCSTISPSTQPSFASYENKQMAAEASKISRSVESNSGSQLRSSRPPPRVPAAKPGRIVGPVLHYDNGRTIKDAYDQRIFYRNTLPQAVSPHCFHRVQPTNTKSTSETYKDISQGKHQLPSQQCSMPARPAIDLNTNPYYQQGKRDHSNDPVASIDAKLLQAQSQFGAVGAAAVAVAAHRHSGSFHYGLS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01475 598 SUPERFAMILY Protein kinase-like (PK-like) 13 312 IPR011009 -
Spst5g01475 598 ProSiteProfiles Protein kinase domain profile. 17 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01475 598 SMART serkin_6 17 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01475 598 CDD STKc_TDY_MAPK 16 353 - -
Spst5g01475 598 Gene3D Transferase(Phosphotransferase) domain 1 103 331 - -
Spst5g01475 598 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 353 - -
Spst5g01475 598 Gene3D Phosphorylase Kinase; domain 1 32 354 - -
Spst5g01475 598 MobiDBLite consensus disorder prediction 437 452 - -
Spst5g01475 598 Pfam Protein kinase domain 17 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01475 598 FunFam Mitogen-activated protein kinase 7 111 - -
Spst5g01475 598 FunFam Mitogen-activated protein kinase 103 331 - -
Spst5g01475 598 ProSitePatterns Protein kinases ATP-binding region signature. 23 47 IPR017441 GO:0005524
Spst5g01475 598 ProSitePatterns MAP kinase signature. 52 155 IPR003527 GO:0004707|GO:0005524|GO:0006468
Spst5g01475 598 MobiDBLite consensus disorder prediction 437 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01475 Spst-Chr5 45085952 45089844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01475 3 596 MAP Kinase Gene Family AT1G53510 70.358 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Spst5g01475 Pkinase 1.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01475 - - gmx:100800878 1105.89