Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01457 ATGGTTGGATTCCAGAGTGACCATAAGCCTGGGAACAAGTACAATGGTAATTCTAATATTATTCCGGATCGTGTTGAACGTCTTATGAGACAAAGGGAGCTATTTAAAAGCGGCAAGACATCTTTTTTGAATGAGGCTCCTGATAGTAATACTATTAATAGTAGTAATGTGATTGCTGAATGTTTTGAGCATGACCCCGGCTTAAGGGAAGATAATAACTCTGCTGCTTCCTATGAACGGTTACGGGAAGAAGTGGCCGCCGCAGTACGGGGCGAGAGGGAAGGTGGGAGGCCTTTCAAACAACGGCTTTTGGTGGTCGCCAATAGGCTGCCGGTCTCGGCAATTAGGAAAGGCGAGGATTCTTGGTCTTTGGAGATAAGTGCTGGGGGCCTCGTGAGCGCTCTTTTAGTTCTTTACAAAGGTGTGAAAGCTTTGGAGGCAAGGTGGATAGGTTGGGCTGGTGTCAACGTGCCAGATGAGATTGGACAAAAAGCACTTACAAAAGCTTTGGCCGAAAAGAGATGTATCCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGCTATTGCAACAACATTTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACACGTAGTTTCCAATCTCAGTTTGAAGCATACCAGAAGGCAAATCAAATGTTTGCCGATGTTGTGAACAAACACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCGCAATGCTTAAAGAATTATAACCGAAAAATGAAAGTTGGCTGGTTTCTACATACCCCATTTCCATCATCCGAAATTCACAGGACATTGCCATCTCGTTCAGAGCTCCTGCACGCTGTTCTTGAAGCTGATTTGGTTGGTGCATGTACTCGCATTCTTGGACTAGAGGGAACGCCTGAAGGGGTTGAGAATCAAGGAAAGTTGACGCGAGTTGCAGCATTTCCAATAGGTATAGACTCAGAAAGATTCATACGTGCACTTGACCTTCCTCAAGTCAAGGGTCATATCAAAGAATTACAAGAGAGATTTAAAGGGAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATCCTGATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTTACTACCGTTCCCATACATCATTTGGATCGCTCTCTTGATTTCCATGCACTATGTGCTTTGTACGCTGTTACGGATGTAGCCCTTGTCACCTCTTTGAGGGATGGAATGAATCTTGTAAGTTACGAATTTGTAGCATGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAGTTTGCCGGTGCTGCACAGTCACTTGGTGCTGGGGCAATTCTGGTCAACCCTTGGAACATCACAGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGCAATCTGAAGAACGAGAGAAGAGACATAAGCATAACTTTAAGCATGTAACAACCCACACTGCTCAGGAATGGGCAGAAACTTTTGTAAGTGAACTAAATGATACTGTTGTGGAGGCACAGCTAAGGACAAAACAATCTCCACCACGGCTCCCAACAGATACTGCAGTGGAACGTTATTTGCAGTCAAATAATCGGTTGCTTATTTTGGGTTTCAATGGAACACTAACTGTACCAGTTGAGAGAAAAGGTGATCAGTATCAAGAATCGGAACTCACAGTGCATCCAGAACTGAAACAACCCTTGGCAGAACTTTGTTGTGACCCAAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGAACAGTTCTAGATCAAAACTTCAAAGAGTATGATATCTGGCTAGCAGCAGAGAATGGAATGTTCTTGAACCCTTCAAAGGGGGAATGGATGACAACAATGCCAGAGCAACTAAATATGGAATGGGTTGACAGCGTGAAGCATGTTTTTGACTACTTCACAGATAGAACACCACGGTCACATTTCGAAGAAAGGGAAGCTTCACTTGTATGGAGTTACAGACATGCAGATGTTGAGTTTGGAAGACTGCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGGCCAATTTCTAATGCTTCAGTTGAAGTTGTTCAAGGGAGCCGGTCTGTTGAGGTGCGAGCTGCTAACGTTACAAAGGGTGCAGCCATCGACCGTATTCTAGGGGAGATAGTCCACAGAAAACCCATGACAACGCCAATTGATTACGTTATGTGTATAGGACATTTTTTAACAAAGCAGGATGAAGATATATATGCGTTTTTTGAGCCAGAGCTACCGTCTATTGGTGTGGGTCTTCCACGAAGTAAGGTAACAGAAGGAGTTAAGTTTCCTGCTGAGAGGATATCGTCATTAAAGATTTCAGCTAGTAAAAATGGAGCAGCGAAATCTTCCCAAAATAAGGGACAACGGGGTTTGCCAAATTCTGAGAAGAAAACAAATAATCATGTGTGCCGTGCACCACGTCGTCCAGCTCCTGAAAAGATCTCTTGGAATGTCAATGTCCTTGACCTGAAGAAGGAGAATTACTTCTCTTGTGCTGTTGGACGAACACAAACGAATGCTCGGTATACGCTTGGATCACCAGATGAAGTTGTTGTATTTCTGAAGGAACTAGCCAATGCATCTCCATATTCTTTTGTCTGA 2802 0.4333 MVGFQSDHKPGNKYNGNSNIIPDRVERLMRQRELFKSGKTSFLNEAPDSNTINSSNVIAECFEHDPGLREDNNSAASYERLREEVAAAVRGEREGGRPFKQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLVLYKGVKALEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNRKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLEADLVGACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFIRALDLPQVKGHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMQSEEREKRHKHNFKHVTTHTAQEWAETFVSELNDTVVEAQLRTKQSPPRLPTDTAVERYLQSNNRLLILGFNGTLTVPVERKGDQYQESELTVHPELKQPLAELCCDPKTTVVVLSGSGRTVLDQNFKEYDIWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFDYFTDRTPRSHFEEREASLVWSYRHADVEFGRLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAANVTKGAAIDRILGEIVHRKPMTTPIDYVMCIGHFLTKQDEDIYAFFEPELPSIGVGLPRSKVTEGVKFPAERISSLKISASKNGAAKSSQNKGQRGLPNSEKKTNNHVCRAPRRPAPEKISWNVNVLDLKKENYFSCAVGRTQTNARYTLGSPDEVVVFLKELANASPYSFV 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01457 933 MobiDBLite consensus disorder prediction 842 866 - -
Spst5g01457 933 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 681 761 - -
Spst5g01457 933 CDD GT20_TPS 102 559 IPR001830 GO:0003824|GO:0005992
Spst5g01457 933 CDD HAD_TPP 592 824 - -
Spst5g01457 933 Gene3D - 595 819 IPR023214 -
Spst5g01457 933 Pfam Glycosyltransferase family 20 102 559 IPR001830 GO:0003824|GO:0005992
Spst5g01457 933 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 102 559 IPR012766 GO:0003825|GO:0005992
Spst5g01457 933 MobiDBLite consensus disorder prediction 842 873 - -
Spst5g01457 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 94 340 - -
Spst5g01457 933 Gene3D Glycogen Phosphorylase B; 341 543 - -
Spst5g01457 933 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 341 543 - -
Spst5g01457 933 Gene3D - 681 761 - -
Spst5g01457 933 SUPERFAMILY HAD-like 591 925 IPR036412 -
Spst5g01457 933 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 562 - -
Spst5g01457 933 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 94 926 IPR001830 GO:0003824|GO:0005992
Spst5g01457 933 Pfam Trehalose-phosphatase 614 821 IPR003337 GO:0003824|GO:0005992
Spst5g01457 933 Gene3D Glycogen Phosphorylase B; 95 340 - -
Spst5g01457 933 NCBIfam trehalose-phosphatase 590 805 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01457 Spst-Chr5 42289680 42301196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01457 10 928 Trehalose Biosynthesis Gene Families AT1G78580 73.242 0.0 1389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01457 K16055 - gmx:100789554 1619.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01457 5 42289680 42301196 Spst5g01457 5 42289680 42301196 ECH