Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01442 ATGTGTTTCAAGCTAGGTCAACTAACCACCATAGTTTTGTCCTTACCAGACATAGCCAAAGAGGTTCTCCAAGCCCATGACTTGTTATTCTCAGATCGAACAGTTCCACTTGCCACAACAGTTCACAACCACAACCATTATAGCTTACCATTTCTCCCCATTTCACCTCTTTGGAGAGACCTTAGGAAAATATGCAACAACCAATTGTTCTCCCACAAGTCCCTTGATGCAAGCCAAAACCTTAGACGCATGAAACTGCATGAGCTCCTCGATGATGTGCATGCGAGCAGCCTCAGTGGTGAAGCCGTGGACATTGGAACAATGGCTTTTAGGGCTTCGATTAATTTTCTGTCAAACACTTTTTTCTCTTTGGATTTTGTCAACTCTGTAGGTGAAGCTGAAGAGTACAAGAGTATCGTGGAGAATCTTGGGAGAGCAATTGCAACGCCAAACTTGGAGGATTTTTTGCCGTTGTTGAATATGGTTGATCCACAAGGCATTAGAAGGCGTGCAGCTATATACGTTTCAAAATTGTTTGCTATTTTTGACTGTTTGATTCATAAACGGTTGAAGTTTGGAAATGTTTCAAATGCTGATGACATGTTAGACACCTTGCTCAACATTTCTCAAGAAGATGGCCAGAAGATGAACCACCAAAAGATTAAGCATTTATTACTGGATCTAATTGTTGCTGGAACTGATACAACTTCCTACACAATGGAATGGGCAATGGCTGAGCTAATAAAAAACCCAGATACAATGTCAAAAGCCAAAGGGGAGCTTGAACAAACCATTGGAATAGGAAACCCTATTGAGGAAGCAGATATTTCAAGACTCCCATACTTGCATGCAATCATAAAAGAGACCTTACGCATGCACCCAGGGGCTCCACTTTTGCTTCCTCGCAAGGCCAAGATAGATGTGGAAATCAATGGCTACACTGTTCCACAGGGTGCACAAATCGTAATCAATGAATGGGCCATTGGAAGAAACCCTAGCATATGGGATAATCCTAATTTGTTTTCACCCGAGTGA 1035 0.4203 MCFKLGQLTTIVLSLPDIAKEVLQAHDLLFSDRTVPLATTVHNHNHYSLPFLPISPLWRDLRKICNNQLFSHKSLDASQNLRRMKLHELLDDVHASSLSGEAVDIGTMAFRASINFLSNTFFSLDFVNSVGEAEEYKSIVENLGRAIATPNLEDFLPLLNMVDPQGIRRRAAIYVSKLFAIFDCLIHKRLKFGNVSNADDMLDTLLNISQEDGQKMNHQKIKHLLLDLIVAGTDTTSYTMEWAMAELIKNPDTMSKAKGELEQTIGIGNPIEEADISRLPYLHAIIKETLRMHPGAPLLLPRKAKIDVEINGYTVPQGAQIVINEWAIGRNPSIWDNPNLFSPE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01442 344 PRINTS E-class P450 group I signature 324 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PRINTS E-class P450 group I signature 283 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PRINTS E-class P450 group I signature 220 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PRINTS E-class P450 group I signature 240 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 Pfam Cytochrome P450 2 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 344 - -
Spst5g01442 344 SUPERFAMILY Cytochrome P450 2 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 Gene3D Cytochrome P450 1 344 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PRINTS P450 superfamily signature 284 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01442 344 PRINTS P450 superfamily signature 231 248 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01442 Spst-Chr5 41305479 41306629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01442 1 344 Cytochrome P450 AT2G45570 41.076 2.51e-91 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01442 - - gmx:100792017 585.104