Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01441 ATGGATTCTAAAATGGGTATAGTTCTCCTTTTATTGGCATGGACCATTATACACTTTCTCTCAAAGAAAATAAGGAGAAAACGAAACCACAAGCTTCCACCAGGACCTTCTCCTATTACCTTTGTGGGAAACCTGGTTGAACTTGGCAAAAAGCCACAGCAAACATTGGCCAAACTTGCTAACCTTCATGGCCCCATAATGTGTTTCAAGCTAGGTCAACTAACCACCATAGTTATCTCCTCACCAGACATAGCCAAAGAGGTTCTCCAAACCCATGATTTGTTATTCTCAGATCGAACAGTTCCACTTGCCACAACAGTTCACAACCACAACCATTATAGCTTACCATTTCTCCCCATTTCACCTCTTTGGAGAGACCTTAGGAAAATATGCAACAACCAATTGTTCTCCCACAAGTCCCTTGATGCAAGCCAAAACCTTAGACGCATGAAACTGCATGAGCTCCTCGATGATGTGCATGCAAGTAGCCTCAGTGGTGTCCCGGTGGATATTGGAGCTTTGGCTTTTAGAACTGCGATTAACTTTTTATCAAACACTTTTTTCTCTTTGGATTTTGTTAACTGTGCAGGTGAAACTGAAGAGTACAAGATCATAGTGGAGAATCTTGTGAGAGCAATTGCAACGCCAAACGTGGCGGATTTTTTCCCGTTGTTGAAGATGGTAGATCCACAAGGCATTAGAAGGCGTTCATCTACTTACATTTCCAAGTTGTTTGTTATTTTTGACAGATTGATTCACAAACGATTGCAGCTTGCAGATATCGTAAATAATGATGATATGTTAGACACCTTGCTCAACATTTCTCAAGAGGACGGTCAAAAGATGGACATCAAAAAGATTAAGCATTTATTCCTTGATCTAGTTGTTGCTGGGACAGATACAACATCATATACAATAAAATGGGCAATGGCTGAGCTAATGAATAACCCAGATGCAATGTCAAAAGCCAAGAGGGAGCTTGAGCAAACCACTGGAATAGGCAACCCTGTTGAGGAATCAGACATTGCAAGACTCCCATATTTGCATGCAATTATAAAAGAGACCTTGCGCATGCACCCATCGGCACCACTTTTGTTGCCAAGAAATGCCAAGATAGATGTGGAAATCAATGGCTACTTTATTCCACAAGGCGCACAAATCGTAATCAATGAATGGGCCATTGGAAGAAACCCTAGCACATGGGATAATCCTAACTTGTTTTCACCCGACAGATTCTTGGGATCAGAAATTGATGTGAAAGGAAGACACTCTCAACTCACACCGTTTGGAGGTGGGCGAAGAATATGCCCTGGCTTGGCCTTAGCTATGAGGATGTTGCCTTTGATGTTGGGATCATTGATCAACACTTTTGACTGGAAATTTGAAAACAATGTGAACCCAGATATTGATATGGGTCAATCCTTGCGAGCTACTCCTTTTAGAATAAACAAATAG 1455 0.4144 MDSKMGIVLLLLAWTIIHFLSKKIRRKRNHKLPPGPSPITFVGNLVELGKKPQQTLAKLANLHGPIMCFKLGQLTTIVISSPDIAKEVLQTHDLLFSDRTVPLATTVHNHNHYSLPFLPISPLWRDLRKICNNQLFSHKSLDASQNLRRMKLHELLDDVHASSLSGVPVDIGALAFRTAINFLSNTFFSLDFVNCAGETEEYKIIVENLVRAIATPNVADFFPLLKMVDPQGIRRRSSTYISKLFVIFDRLIHKRLQLADIVNNDDMLDTLLNISQEDGQKMDIKKIKHLFLDLVVAGTDTTSYTIKWAMAELMNNPDAMSKAKRELEQTTGIGNPVEESDIARLPYLHAIIKETLRMHPSAPLLLPRNAKIDVEINGYFIPQGAQIVINEWAIGRNPSTWDNPNLFSPDRFLGSEIDVKGRHSQLTPFGGGRRICPGLALAMRMLPLMLGSLINTFDWKFENNVNPDIDMGQSLRATPFRINK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01441 484 Gene3D Cytochrome P450 18 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 SUPERFAMILY Cytochrome P450 33 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 CDD CYP76-like 60 482 - -
Spst5g01441 484 FunFam Cytochrome P450 76C4 24 483 - -
Spst5g01441 484 Pfam Cytochrome P450 33 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Spst5g01441 484 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst5g01441 484 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01441 Spst-Chr5 41249665 41252503 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01441 3 483 Cytochrome P450 AT2G45550 40.688 1.80e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01441 - - gmx:100792017 785.793