LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst5g01432	ATGAAAGAGATAGCTAAGAGACTTGGGAAGAAGGATTGGGATTTCAATGTAGATCCATGCAGTGGAGAAAGAAATTGGACTTCATCTGTTCAAGTGAAGGGATTTGAAAATGCTGTGACCTGCAATTGTCTCTTTGCCAATGCCACTATCTGCCATGTGGTTAGCATTGTTCTGAAGTCACAAAATCTTTCGGGCACACTCCCAAGTGAACTAGCAAGATTGCAATACCTGCAAGAAATTGACCTCACCCGCAACTACCTTAATGGCACAATTCCTCCACAATGGGGCTCCATCAACCTTGTCAACATTTCCGTTCTTGGAAATCGGCTGACAGGTCCAATACCAAAAGAATTAGGAAACATCACCACACTGAAAAGTTTGGTCCTGGAGTTCAATCAATTATCTGGAGAGCTTCCTCTAGAGATTGGGAATCTCTTTCGACTTGAAAGATTGCTTCTTACATCCAACCATTTTATCGGAAATTTACCAACAACATTTGCCAGCCTCACTGCACTAAAGCATCTTCGACTTGGAGACAACCAATTCTCTGGAACTTTACCTGATTTCATTCAGAGATGGACAAGTCTAGAGAGGCTGGTGATGCAAGGGAGTGGTTTCAGTGGGCCAATTCCTTCTGGAATTTCATTTTTGAACAATCTCACTGATTTGAGAATTAGTGACTTGAAAGGACCAGATTCTCAATTTCCCCAACTTCAAAACTTAACAACTTTGCAAACACTAGTACTGAGGAGTTGCAATCTTATAGGAATGGTTCCTGAATATCTTGGAAATATGACTAGCTTACGATCATTATATTTAACTGGAAACCTTTTCAATGGACCACTACCCAATTGGATAGATAGGCCAGACTACACTGATCTCTCATATAACCATTTGAACATCGAAAACCCAGAGCAATTGACCTGTCAACAGGGAAGCGTGAACTTGTTTGCATCATCTATGAAGGGAAATGACTCGGGAATGATTCCATGTTTAGGGAACATTAACTGTCCTAAAACTTGGTACTCTCTATATATAAATTGTGGTGGGAAGTCAATTTCTGATGGAAACATAAAATATGATGATGATTCACAAGAAGCTGGACCAGCAAGATTTCATCGAGCTGGATCAAATTGGGTGTTTAGCAACACTGGTCATTTCTTTGATAGTGGTCGTGTAGACTACTATACTTGGTCTAATACAACTGAGCTTGATATGAACAATGGCGAATTGTATATGGATGCACGTGTTTCTGCCCTTTCTCTAACATATTATGCATTTTGCATGGGAAATGGAAGCTACACAATAAGTCTTCATTTCGCAGAAATAATGTTCACTGATGATCAAACATATAGCAGCCTTGGAAGGCGTGTATTTGACATCTATGTTCAGAGAAAGTTGGTGCTGAAGGATTTCAATATTGCAAATGAAGCAGGAGGAGTTGGTAAAGCAATCATAAAAAAGTTCACTGCTACAGTGAATAGCAGTACCTTAGAGATTCGCTTGCAGTGGGCTGGGAAAGGAACAACTGGTATCCCATTTGGATCAGTTCATGGCCCTCTTGTATCAGCTATATCTGTTGAACCTGATTTTACACCCCAAGAGGAAAATAAAGATGGTGTACCTAGACATTTCATTGTCGCAATTGTAGTTACTGGAGCACTTGTTATCATCATAATATTTGGTATAGCTTGGTGGAGAGGATGTTTAAGACGAAAAATGTCATTAGAGAAAGAATTAATGGGTTTAGATCTGAAAACGGGCTTATTTAGCTTACGACAAATCAAAGCTGCGACCAATAACTTTGATATCACCTTCAAGATTGGAGAAGGAGGTTTTGGTCCTGTTTACAAGGGTGTTCTTTCAGATGGCACAGTAATAGCAGTTAAACAACTTTCTTCTAAATCAAAACAAGGGAATCGTGAGTTTATAAACGAGATTGGCATGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAACTTTATGGTTGTTGTATGGAGGGAGATCAGTTGATGTTGATATACGAATACATGGAAAACAACAGTCTTGCTCGCGCTTTGTTTGCACAAGAAAAAATTCAATTGAAGTTGGATTGGTCAACCAGACAAAGGATTTGTGCTGGTATTGCTAGAGGTTTGGCTTACCTCCACGGAGAGTCAAGGCTAAAGATAGTTCACAGGGACATAAAGGCCACTAATGTGTTACTAGACAAAAATCTCAACCCAAAGATATCTGATTTTGGTTTGGCCAAACTTGATGAAGATGGCTATACACACATAACTACCAGAGTAGCTGGCACCTATGGATACATGGCCCCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCAGATGTTTATAGTTTTGGTATTGTAGCTTTGGAAATTGTTAGTGGAAAGAGTAACTCCATGAACTGGCCAAAGGGAGAATGTTTCTCTCTTGTTGATTGGGTGCATCTATTGAAAGAACAAGGTAATCTAATGGACCTAGTTGATGAGAGGTTGGGTAAGGATTTCAAAAGAAATGAAGTAGAAGTGATGATTAATGTGGCTCTATTATGCACACAAGTTTCTCCAATGCACAGACCCACCATGGCTTCAGTTGTATGCATGCTTGAAGGCAAAATTGTTATTCAAGAGGTGGTGTCAGATACAAGTGAAGAATTGGATGGAAAGAAGTTGGAGATGCAACAATATTACCATACGAGACAAAAAAATAAGACTCATGAGACTCAAGAAGAGAGCATCTCTATGGGTGAGACTTCAGCATTTATGTCTGACACAGATCTATATTCTATCAAAATGGATTGTTCTTTCTAG	2823	0.3936	MKEIAKRLGKKDWDFNVDPCSGERNWTSSVQVKGFENAVTCNCLFANATICHVVSIVLKSQNLSGTLPSELARLQYLQEIDLTRNYLNGTIPPQWGSINLVNISVLGNRLTGPIPKELGNITTLKSLVLEFNQLSGELPLEIGNLFRLERLLLTSNHFIGNLPTTFASLTALKHLRLGDNQFSGTLPDFIQRWTSLERLVMQGSGFSGPIPSGISFLNNLTDLRISDLKGPDSQFPQLQNLTTLQTLVLRSCNLIGMVPEYLGNMTSLRSLYLTGNLFNGPLPNWIDRPDYTDLSYNHLNIENPEQLTCQQGSVNLFASSMKGNDSGMIPCLGNINCPKTWYSLYINCGGKSISDGNIKYDDDSQEAGPARFHRAGSNWVFSNTGHFFDSGRVDYYTWSNTTELDMNNGELYMDARVSALSLTYYAFCMGNGSYTISLHFAEIMFTDDQTYSSLGRRVFDIYVQRKLVLKDFNIANEAGGVGKAIIKKFTATVNSSTLEIRLQWAGKGTTGIPFGSVHGPLVSAISVEPDFTPQEENKDGVPRHFIVAIVVTGALVIIIIFGIAWWRGCLRRKMSLEKELMGLDLKTGLFSLRQIKAATNNFDITFKIGEGGFGPVYKGVLSDGTVIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCMEGDQLMLIYEYMENNSLARALFAQEKIQLKLDWSTRQRICAGIARGLAYLHGESRLKIVHRDIKATNVLLDKNLNPKISDFGLAKLDEDGYTHITTRVAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKSNSMNWPKGECFSLVDWVHLLKEQGNLMDLVDERLGKDFKRNEVEVMINVALLCTQVSPMHRPTMASVVCMLEGKIVIQEVVSDTSEELDGKKLEMQQYYHTRQKNKTHETQEESISMGETSAFMSDTDLYSIKMDCSF	940

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst5g01432	940	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	678	885	-	-
	Spst5g01432	940	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	341	530	-	-
	Spst5g01432	940	FunFam	Putative LRR receptor-like serine/threonine-protein kinase isoform A	162	229	-	-
	Spst5g01432	940	Gene3D	Ribonuclease Inhibitor	164	337	IPR032675	-
	Spst5g01432	940	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	1	902	-	-
	Spst5g01432	940	Gene3D	Ribonuclease Inhibitor	9	163	IPR032675	-
	Spst5g01432	940	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A	1	156	-	-
	Spst5g01432	940	SMART	serkin_6	602	873	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst5g01432	940	CDD	STKc_IRAK	608	875	-	-
	Spst5g01432	940	ProSiteProfiles	Protein kinase domain profile.	602	883	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Spst5g01432	940	SUPERFAMILY	L domain-like	48	296	-	-
	Spst5g01432	940	Pfam	Malectin domain	343	525	IPR021720	-
	Spst5g01432	940	Gene3D	Transferase(Phosphotransferase) domain 1	678	890	-	-
	Spst5g01432	940	Gene3D	Phosphorylase Kinase; domain 1	569	677	-	-
	Spst5g01432	940	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	724	736	IPR008271	GO:0004672\|GO:0006468
	Spst5g01432	940	Gene3D	-	341	529	-	-
	Spst5g01432	940	SUPERFAMILY	Protein kinase-like (PK-like)	586	876	IPR011009	-
	Spst5g01432	940	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	571	677	-	-
	Spst5g01432	940	Pfam	Protein tyrosine and serine/threonine kinase	606	871	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst5g01432	Spst-Chr5	40904462	40917058	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst5g01432	1	928	Receptor kinase-like Gene Family	AT1G53420	52.549	0.0	962

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Spst5g01432		PK_Tyr_Ser-Thr	4.5e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst5g01432	-		-	gmx:100786496	1640.55