Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01431 TCTGAATTGGAGTTTACTTGCATGCATAGAGATCTTTCATATAACAACTTCACCAGTGCAAATTTTGAGCTATGCCAAGAGACTAAAGGGGCAATTCCTGCAAACTGTCCAAAATACGTTTCCTCTGTCAATATTAATTGTGGTGGTGCACAAGTGACAAGTAGTGAACGTATATTATATAGTGATGACTTGGATCTATCAGGAGCAGCAACATCTAAGAAATACAATGAAAACTGGGCATTTAGCAATACCGGTCACTTCTTGGATAGTAAAGAAGAAAAAACCTATATCCAGCAAAGTACCGTTAAACTTTCTATGACTGCTGATTCTGAATTGTATCAGACCGCGCGTGTATCCCCCATTTCCCTGACTTACTATGGATTGTGTCTGGAAAATGGAACCTACACTGTATCTCTGCATTTTGCAGAGATCATGTTCACTGATGATGACACATATAGCAGCCTAGGGAGACGTATATTTGATGTTTACATTCAGGGAAAGCTAGAATTGAAGGATTTCAATATTGCAAATGCAGCAGGAGGAGTTGGGAAGAACGTTACAAGAACAATTTCAACTAGTGTGAGTAATAACTCTCTGGAAATTCGGTTTTATTGGGCTGGAAAAGGAACAACTGCTATACCATATAAATCAGTATATGGTCCTCTTATATCAGCTGTATCTGTCACTCGCGTTGGCAATGACTCTACAAATCACACGGACGGTCGTAGCATTGCTACAGGGGTTGTAATTGGAATAGTATTTTCTGCAATTGTTCTTGTCATCCTTATTGTACTTGGCTTGAGGATTCAGTTTAGGAAAAGAAATTCATTGGCAAAAGAGTTAAAGCATTTAAATTTGCAAATGGGTTTGTTTACCATGCGTCAAATCAAAGTTGCAACGAATAACCTTGATATCTCTAATAAGATTGGAGAAGGAGGCTTTGGTCCTGTCTACAAGGGTGTTTTATCAGATGGCACAATAATAGCTGTTAAGATGCTTTCATCAAAGTCAAAGCAAGGGAACCGTGAGTTTATAAATGAGATAGGTTTGATTTCAGCTTTGCAGCACCCTTGTCTTGTTAAACTTTATGGCTGTTGTGTTGAGGGTGATCAGTTGTTCCTGGTATACGAATACATGGAAAACAATAGCCTTGCACATGCTTTATTTAAAAACGGAGAATCTTGTTTGCAATTGGATTGGCCAACAAGGTATAAGATCTGTGTTGGTATAGCTAGGGGTTTGGCTTTTCTACATGAAGAATCAAGATTGAAAGTTGTTCATAGGGACATTAAGGCTACTAATGTGTTGTTAGACAAAGACTTGAACCCAAAGATATCTGACTTTGGTCTTGCCAAACTTGATGATGAGGACAATACTCACATAAGCACAAGAATAGCCGGCACATATGGATATATGGCTCCAGAGTATGCCATGCATGGTTATTTGACTGATAAAGCAGATGTGTATAGTTTTGGAGTTGTTGCCTTGGAAATTGTAACAGGAAAGAGCAACACCATCCCTCGACCCAAACAAGAAGCATTGCATAATCTTTTAGATTGGGCACAATTATTGAAAGAGAAAGGTAATCTGATGGAGCTAGTTGATAGAAGGTTAGGATCAAATTTCAATGAAGATGAGGTAATGAAGATGATCAAAGTGGCTCTCCTGTGCACAAATGCCACTTCAAACCTCAGGCCTACCATGTCATCAGTGCTTAGCATGCTTGAAGGAAAAACTGTGATTCCAGAATTAATTTCAGATCAAAGTGAAACTATGGATGATATGAAGTTAGAGGCTCTGAGACAATATTACTCTCAAATGGAAGAAAATGAGAAAAGTGAGACACATACAAATCATAGTACATCGATTGATGGGAAATGGACTGCTTCATCTTCATCTGCTGCAGACCTGTACCCAGTCCACATTGATTCTTCTTATTGGGAGAAAAGATAA 1953 0.3856 SELEFTCMHRDLSYNNFTSANFELCQETKGAIPANCPKYVSSVNINCGGAQVTSSERILYSDDLDLSGAATSKKYNENWAFSNTGHFLDSKEEKTYIQQSTVKLSMTADSELYQTARVSPISLTYYGLCLENGTYTVSLHFAEIMFTDDDTYSSLGRRIFDVYIQGKLELKDFNIANAAGGVGKNVTRTISTSVSNNSLEIRFYWAGKGTTAIPYKSVYGPLISAVSVTRVGNDSTNHTDGRSIATGVVIGIVFSAIVLVILIVLGLRIQFRKRNSLAKELKHLNLQMGLFTMRQIKVATNNLDISNKIGEGGFGPVYKGVLSDGTIIAVKMLSSKSKQGNREFINEIGLISALQHPCLVKLYGCCVEGDQLFLVYEYMENNSLAHALFKNGESCLQLDWPTRYKICVGIARGLAFLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDDEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGVVALEIVTGKSNTIPRPKQEALHNLLDWAQLLKEKGNLMELVDRRLGSNFNEDEVMKMIKVALLCTNATSNLRPTMSSVLSMLEGKTVIPELISDQSETMDDMKLEALRQYYSQMEENEKSETHTNHSTSIDGKWTASSSSAADLYPVHIDSSYWEKR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01431 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Spst5g01431 650 Pfam Malectin domain 43 226 IPR021720 -
Spst5g01431 650 FunFam Putative LRR receptor-like serine/threonine-protein kinase 379 587 - -
Spst5g01431 650 CDD STKc_IRAK 309 577 - -
Spst5g01431 650 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 9 612 - -
Spst5g01431 650 Gene3D Phosphorylase Kinase; domain 1 265 378 - -
Spst5g01431 650 Gene3D - 41 232 - -
Spst5g01431 650 ProSiteProfiles Protein kinase domain profile. 303 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01431 650 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 40 231 - -
Spst5g01431 650 Pfam Protein tyrosine and serine/threonine kinase 304 574 IPR001245 GO:0004672|GO:0006468
Spst5g01431 650 SUPERFAMILY Protein kinase-like (PK-like) 287 578 IPR011009 -
Spst5g01431 650 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 272 378 - -
Spst5g01431 650 SMART serkin_6 303 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01431 650 Gene3D Transferase(Phosphotransferase) domain 1 379 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01431 Spst-Chr5 40705559 40709634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01431 11 636 Receptor kinase-like Gene Family AT1G07650 53.869 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01431 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01431 - - vum:124835551 1019.61