Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01428 ATGCCAACCAACATGAACACCATCATCTCCTCTCGTTTTGTCCTCCTTTCACTCCTTCCAATTTGCTTCACATGCCTTGCTTTTGGAGCCACCACACTGTCGCAGTATGAAGTGTCAGTGATGAAAAGTGTAGCAAAAACACTGGGAAAGGACTGGGACTTCGATGTACATCCATGCAACCAGACCCAGTCAGGAGACAATACCATTTATTGCAATTGCCAAGTACCCAATGACAGCTTCTGCCATGTTGAGAAAATTTCACTTCTTGGAAACAGACTAACTGGTCCAATCCCAAAAGAGCTGGGAAACCTCATCACTCTTACACGCTTGATCCTTGAGTTCAATAGCTTATCTGGAAATCTTCCTTCAGAACTTGGAAATCTTGTCCTCATTAATCAACTGTATCTAAGTTCCAATAACTTCACTGGTCAATTGCCAGAAAAGCTTTCCAGTCTTACTGCAATGAAGGATTTAGACCTAAGCTATAACAAATTAAATGGACCAGTGCCAGGAAACCTTCAAGAATTAATAGCAGCAACGTACACGAACTTGTTTGCAAGCTTTTCAAGGAATAAAGGACCAGTTTCTTGTGACAGTAGCAATAGAAACTGTACCAAAAAAGTTAAATCTCTGCATATAAATTGTGGTGGAAATCAGACTACTATTGGAGGTATAACATATGATGAAGATATATATCCAGCTGGACCTGCAGTATATCAACTAAGTAGAAACAATTGGGCATTGAGCAACACGGGTCACTTCCTGGACAATAATACTATTCCTTCAGGACACTATACCACAGAAAATGAAACTAGGCTTTACATGACTGATGCTGAATTATATAAGAAAGCACGTATTTCCCCTATGTCTTTGACTTATTATGGATTTTGCTTAGAAAATGGAGTCTACACAGTAAAACTTCACTTTGCTGAGATAATGTTCACGGATGATCACACATACAGCGACTTAGGGAGGCGTGTATTTGATGTATACATTCAGGGGGAGCGAGTGTTGAAAGATTTTAACATTGCAGTTGAAGCACAAGGTGTTGGAAAGGAACTCATAAAACAATTTCGTGCTAATGTGAGTGGTAATGACCTAGAGATCCGCTTCTACTGGGCTGGAAAAGGGACAACAAATATACCATATAAATCAGTAAATGGTCCTCTTGTATCTGCCATTTCTGTCTACTATGATGGGTTTTCATTTAGCATACTTTGGTGGAGGGGTTTCATTAGTGGTTGTTGTCTTGTTGATTCTTGTTGGCATACTTTGGTAGAGGGGTTATGGTCAAACTCAAACTACCTGGCTCACTTTGGTGTTGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTCGGTCCTGTATATAAGGGCATTCTGCCAAACAGCAAACCAATAGCAGTTAAACAACTTTCATCTACATCAGAGCAAGGAAGCCGTGAGTTTGTAAATGAGATAGGAATGATCTCTGCTCTGCAGCACCCTAATCTGGTTAAACTATATGGTTGTTGTGTTGAGGGTGATCAACTGTTGTTAGTATATGAATATATGGAAAACAATAGCCTTGCACGTGCTTTATTTGAAGACTCAGAACATAGTCATTTAAAATTGAATTGGCCAACCAGACAAAATATTTGTGTTGGCATTGCTAGAGGGTTAGCTTTCCTGCATGAAGAATCAAGATTGAAAGTTGTTCATAGAGACTTAAAGAGCTCTAACGTGTTGCTTGATGAAGACCTGAACCCAAAAATATCCGATTTTGGTTTGGCCAGACTTCGTGAGGGGGACAATACACACATAAGCACCAGAATTGCAGGGACTTGGGGATATATGGCTCCTGAGTATGCAATGCATGGTTATCTAACTGAAAAAGCAGATGTTTATAGTTTTGGAGTAGTTACCTTGGAAATTGTAAGTGGAAAGAGAAACACTATTTGGCAGTCAAGGGGGGAAGATTTCTATCTTCTGGATTGGGCAGGTTTGTTGAAAGAAAGAGGTGGCATAATGGAGCTAGTTGATCGAAAGTTGGGTCAAGATTTCAATGAAGATGAGGTAATGTTGATTGTCAAAGTGGCTCTCCTTTGCACCAATGTCACTTCAAGCCTTAGGCCTTCTATGTCTTCAGTAGTAAGCATGCTTGAGGGCAGAACAATGGTCCCAGAGTCTGTTTCACATTCTAGTGAAGTTATGGATGAGATGAGGTTAGAGGTAATGAGAGAGTTTTACAGCCAAATTGATGAAAATACAGCAAGTGAGACACGAAGGTTGAGCTTAACAATAGGTGTTCCATGGACTGGTTCATCTTCATCAGCTACAGAACTTAATTTCACTCACCTTGATGCTTCCTCTTGA 2367 0.4001 MPTNMNTIISSRFVLLSLLPICFTCLAFGATTLSQYEVSVMKSVAKTLGKDWDFDVHPCNQTQSGDNTIYCNCQVPNDSFCHVEKISLLGNRLTGPIPKELGNLITLTRLILEFNSLSGNLPSELGNLVLINQLYLSSNNFTGQLPEKLSSLTAMKDLDLSYNKLNGPVPGNLQELIAATYTNLFASFSRNKGPVSCDSSNRNCTKKVKSLHINCGGNQTTIGGITYDEDIYPAGPAVYQLSRNNWALSNTGHFLDNNTIPSGHYTTENETRLYMTDAELYKKARISPMSLTYYGFCLENGVYTVKLHFAEIMFTDDHTYSDLGRRVFDVYIQGERVLKDFNIAVEAQGVGKELIKQFRANVSGNDLEIRFYWAGKGTTNIPYKSVNGPLVSAISVYYDGFSFSILWWRGFISGCCLVDSCWHTLVEGLWSNSNYLAHFGVATNNFDISNKIGEGGFGPVYKGILPNSKPIAVKQLSSTSEQGSREFVNEIGMISALQHPNLVKLYGCCVEGDQLLLVYEYMENNSLARALFEDSEHSHLKLNWPTRQNICVGIARGLAFLHEESRLKVVHRDLKSSNVLLDEDLNPKISDFGLARLREGDNTHISTRIAGTWGYMAPEYAMHGYLTEKADVYSFGVVTLEIVSGKRNTIWQSRGEDFYLLDWAGLLKERGGIMELVDRKLGQDFNEDEVMLIVKVALLCTNVTSSLRPSMSSVVSMLEGRTMVPESVSHSSEVMDEMRLEVMREFYSQIDENTASETRRLSLTIGVPWTGSSSSATELNFTHLDASS 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01428 788 ProSiteProfiles Protein kinase domain profile. 446 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01428 788 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 23 176 - -
Spst5g01428 788 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 208 399 - -
Spst5g01428 788 SUPERFAMILY L domain-like 79 182 - -
Spst5g01428 788 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 78 169 - -
Spst5g01428 788 FunFam Putative LRR receptor-like serine/threonine-protein kinase 522 730 - -
Spst5g01428 788 Gene3D Phosphorylase Kinase; domain 1 430 521 - -
Spst5g01428 788 SMART serkin_6 446 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01428 788 Gene3D Transferase(Phosphotransferase) domain 1 522 739 - -
Spst5g01428 788 Pfam Protein tyrosine and serine/threonine kinase 448 717 IPR001245 GO:0004672|GO:0006468
Spst5g01428 788 CDD STKc_IRAK 452 720 - -
Spst5g01428 788 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 427 521 - -
Spst5g01428 788 SUPERFAMILY Protein kinase-like (PK-like) 432 721 IPR011009 -
Spst5g01428 788 Gene3D - 213 399 - -
Spst5g01428 788 Pfam Malectin domain 210 394 IPR021720 -
Spst5g01428 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 569 581 IPR008271 GO:0004672|GO:0006468
Spst5g01428 788 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01428 Spst-Chr5 40385449 40399876 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01428 92 778 Receptor kinase-like Gene Family AT1G07650 48.619 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01428 PK_Tyr_Ser-Thr 4.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01428 - - gmx:100791136 975.696