Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01426 GGTATACTGTCAGACGGTGCTGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCAAAACAAGGGAATCGTGAATTCATCAATGAAATCGGCATGATATCTGCATTGCAGCATCCAAATCTGGTGAAACTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTGCTAGTATATGAATACATGGAGAACAATAGTCTTGCTCGTGCACTTTTTGGTAAAGAACATGAGAGGATGCAATTGGACTGGCCCAGAAGAATGAAGATTTGTGTGGGGATTGCAAAGGGATTAGCTTATCTCCATGAAGAGTCAAGGTTGAAAATAGTACACAGGGATATTAAGGCAACCAATGTCTTACTTGATAAGCATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCCAAACTTGATGAAGAAGAGAATACCCATATCAGCACACGAATAGCCGGGACAATTGGTTACATGGCTCCAGAGTATGCTATGCGGGGTTACCTGACTGACAAGGCAGATGTCTATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAGGAGGAGTTTGTGTATCTTTTAGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGATTTGGTGGATCCAAGTCTTGGTTCAAAGTACTCCTCAGAAGAGGCCATGAGAATGCTGCAGTTAGCACTCTTGTGCACCAATCCTTCTCCCACTCTTAGACCACCTATGTCATCGGTAGTGAGCATGCTTGAGGGAAAAACTCCAATTCAAGCACCAATAATCAAATGCAGTGATAATGCACAAGAAGTGAGATTTAAAGCTTTTGAGTTGTTATCGCACGACAGCCAAACTCATGTCTCTTCTGCTTTCTCACAAGATAGCTTAGAGCATAGAAGCAAATCACTGGAGGGACCATGGGCTGATTCCACCACATCTCTTACAAGTAGGATCGATCATTCTTCAGGCGATAAACTTATTAGAAGTTCGAACGATGTGTGA 1014 0.426 GILSDGAVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYMENNSLARALFGKEHERMQLDWPRRMKICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLDLVDPSLGSKYSSEEAMRMLQLALLCTNPSPTLRPPMSSVVSMLEGKTPIQAPIIKCSDNAQEVRFKAFELLSHDSQTHVSSAFSQDSLEHRSKSLEGPWADSTTSLTSRIDHSSGDKLIRSSNDV 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01426 337 Gene3D Transferase(Phosphotransferase) domain 1 61 274 - -
Spst5g01426 337 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01426 337 SUPERFAMILY Protein kinase-like (PK-like) 2 256 IPR011009 -
Spst5g01426 337 CDD STKc_IRAK 1 257 - -
Spst5g01426 337 MobiDBLite consensus disorder prediction 306 337 - -
Spst5g01426 337 FunFam Putative LRR receptor-like serine/threonine-protein kinase 60 267 - -
Spst5g01426 337 FunFam Os04g0616200 protein 1 60 - -
Spst5g01426 337 Gene3D Phosphorylase Kinase; domain 1 1 60 - -
Spst5g01426 337 MobiDBLite consensus disorder prediction 309 324 - -
Spst5g01426 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Spst5g01426 337 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 287 - -
Spst5g01426 337 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01426 337 Pfam Protein tyrosine and serine/threonine kinase 8 253 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01426 Spst-Chr5 39961962 39963417 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01426 1 317 Receptor kinase-like Gene Family AT1G53430 77.188 1.38e-177 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01426 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01426 - - gmx:121173337 616.305