Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01422 ATGACGTCGGGGACGAGGCTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGGAGAGAGAGAAGAAGAAGAGCCATAGCAGCGAAGATCTTCGCAGGTCTGAGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAAGCTGGTTGGACCGTTGAACCCGATGGAACCACTTACCGTAAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCAAGTCCATGCTCATCTTACCATCCAAGTCCATGTGCTTCATACAATCCAAGCCCTGGCTCATCTTCCTTCCCAAGCCCATCCTCATCCCCTTACACCAACATTCCCAATGCTGATGGCAATTCCCTCATTCCATGGCTCAAAAACCTCTCCACTGCTTCATCTTCAGCATCATCTCCCAAGCTTCCCCATCTCTACCTCCACAGTGGCTCCATCAGTGCTCCTGTCACACCTCCTCTGAGCTCTCCAACTGCCAGAACACCACGAATCAATGCTGAGTGGGAGGATCAGTCTGCACGGCCGGGGTGGACTAGACAGCAGCACTACTCCTTCCTGCCATCTTCTAGTCCTCCAAGCCCCGGCCGCCAGGTTGTTGACCCTGAATGGTTTGCTGGGATCAAACTTCCTCATGCTAATCCAACCTCACCAACATTCAGCTTGATCTCCTCAAACCCTTTTGCTTTCAAGGAAGATGGTTTGGCAGGCAGTGGTTCGCGAATGTGGACACCGGCTCACAGTGGAACATGCTCTCCAGCTGTTGCACCAGGCACTGATCACAATGCTGACATTCCAATGTCTGAGGCTGTTTCAGATGAATTTGCGTTTGGAAGCAACATGCTGGGGCTTGTGAAGCCATGGGAAGGAGAAAGAATCCATGAGGAATTTGGATCAGATGATCTCGAACTCACACTCGGTAACTCAAAGACCAGTTATCTTAAGAGCTGTGCTTCACAGTTGATGACAGTTAAATGTGTAAAACCCTTTTACCCTATAGGAATGGCAGCAATTGAATGTGATTATGTGAACATTGACTTCTGTTGGTTTTGTTCAGTAGATATGTGTGGGGTGATTTGCAACCCATACATCACTGTACTTGTTGTTAAACCTTATGACTGGAAACATCAGTATACATTGTATGGATTGGCTTGGTTTGCCACTGAAAGAACTCCACAGATTGCACCCTAA 1230 0.4854 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTNIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWEDQSARPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHANPTSPTFSLISSNPFAFKEDGLAGSGSRMWTPAHSGTCSPAVAPGTDHNADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKTSYLKSCASQLMTVKCVKPFYPIGMAAIECDYVNIDFCWFCSVDMCGVICNPYITVLVVKPYDWKHQYTLYGLAWFATERTPQIAP 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01422 409 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 139 IPR008540 -
Spst5g01422 409 MobiDBLite consensus disorder prediction 183 210 - -
Spst5g01422 409 MobiDBLite consensus disorder prediction 1 20 - -
Spst5g01422 409 MobiDBLite consensus disorder prediction 188 209 - -
Spst5g01422 409 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01422 Spst-Chr5 39889624 39893721 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01422 1 324 BZR Transcription Factor Family AT1G78700 70.060 2.00e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Spst5g01422 BES1_N 5e-66 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01422 - - gmx:100795369 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01422 5 39889624 39893721 Spst5g01422 5 39889624 39893721 ECH