Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01386 ATGAGCGCTTCTTCTCCTTCTTCTTCCTTCGGGGAGCTTTACACTAAATGGTTTGAGGAGCTGCAGGGGGTGGTGCAGCGGCTGAAGGATGAGCGTAACGACGAGGTGATGGAGAAGGTTATTGGAAAGCACCAGCACTACTACAGAGCAAAGTGGGAGGCAGTGGAGAAGGACCCTCTCAACATGTTCCTCTCTCCCTGGGCTACCTCCCTTGAACGCTCCCTCCACTGGATCACTGGGTGGCGCCCCACCACCGCCTTCCACCTCATCTACACTGAGTCTTCCCTCCTCTTTGAGTCTCACATAGTTGACATCCTCCAAGGCTTCCGTACCGGCGATCTCGGTGACCTCTCCCCCTCCCAGTTCCGCCTCATGAGCGATCTCCAGTGTGAAACTGTGAAAGAAGAGAACATAATTACAGAAGAGTTATCAGAATGGCAGGAAACTGTGAGCGAAATGATGGGTCCAGACAGAGAGATAGATGAGAAGATGGATGAGAAGATTGTTGAGCTGATCAGCATCATAAAGAAAGCAGATGATTTACGGTTGAGAACGCTGCGGAATGTGGTGGGGCTGCTCTCCAAACAGCAGGCTATTGAATTCCTGATTGCCTCAGCAGAGTTACTCATCGGGATTCGATGCTGGGGAATGAACCACGATGGTGCATAG 669 0.5157 MSASSPSSSFGELYTKWFEELQGVVQRLKDERNDEVMEKVIGKHQHYYRAKWEAVEKDPLNMFLSPWATSLERSLHWITGWRPTTAFHLIYTESSLLFESHIVDILQGFRTGDLGDLSPSQFRLMSDLQCETVKEENIITEELSEWQETVSEMMGPDREIDEKMDEKIVELISIIKKADDLRLRTLRNVVGLLSKQQAIEFLIASAELLIGIRCWGMNHDGA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01386 222 ProSiteProfiles DOG1 domain profile. 7 222 IPR025422 GO:0006351|GO:0043565
Spst5g01386 222 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 9 220 - -
Spst5g01386 222 Pfam Seed dormancy control 20 92 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01386 Spst-Chr5 37832671 37834033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01386 8 219 Calmodulin-binding Proteins AT5G65210 22.414 9.30e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01386 - - gmx:778192 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01386 5 37832671 37834033 Spst5g01386 5 37832671 37834033 ECH