Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01370 ATGGCACAGTTACCTCCTAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCCACAATGGCCAACTTCACCCCCCCAACCTCATCCACCACCACCGTCGCCGCCACCACCACCACTCCTTCCCAACCCTCTTGGGTCGACGAGTTCCTCGACTTCTCGTCCACCCGGCGGGGGGCTCACAGGCGATCCGCCAGTGACTCCATTGCCTTTCTCGAGACGCCGTTTCTGGAGGAATGTCGAGCCGGTTTCGACCGACTCGACGAGGACCAGCTGATTTCCATGTTCTCTGATGACATTGCCGCCGCGGCGCTCCCGCCGCCACCGCTGTCGTCGGCGTCCAATCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGGCGCTGGACGTGAAGCCGAAGACGGAAACGGTTGAAGAGGAGAGCTCGTGCAGGAACGAGGCCGCGGCGCCGCCACTCTCCGCCACTGCCACCTGCACTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGGTCAAGGGTAAGAAAGCTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACTTTGCAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAACGTCGACAATAGTGCCTTGAAGCAACGCATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGATGCTCATCAAGAGGCATTGAAGAAGGAGATAGAGAGACTGAGGCAAATCTACCACCATCAGAACCTACAAAAGATGCGTAACACAGTGAACAACAATCTTCAAACCCCACCAACATCACAATCACAAGCAGCAATGCAATCACCTTCCCTTCATCAGCATCAGCAGCAGAAAACAGTGTCTCAACCATTGGGATACAAGGACAAGGAACAGCTCCAGAGTTGA 987 0.5329 MAQLPPKIPTIPQNWPSFPHQRVPTMANFTPPTSSTTTVAATTTTPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMALDVKPKTETVEEESSCRNEAAAPPLSATATCTETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHHQNLQKMRNTVNNNLQTPPTSQSQAAMQSPSLHQHQQQKTVSQPLGYKDKEQLQS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01370 328 Coils Coil 258 278 - -
Spst5g01370 328 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Spst5g01370 328 Pfam bZIP transcription factor 179 224 IPR004827 GO:0003700|GO:0006355
Spst5g01370 328 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Spst5g01370 328 SUPERFAMILY Leucine zipper domain 179 233 IPR046347 GO:0003700|GO:0006355
Spst5g01370 328 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Spst5g01370 328 FunFam Basic leucine zipper 61 178 251 - -
Spst5g01370 328 Gene3D - 178 251 - -
Spst5g01370 328 MobiDBLite consensus disorder prediction 120 134 - -
Spst5g01370 328 MobiDBLite consensus disorder prediction 109 134 - -
Spst5g01370 328 PANTHER BASIC LEUCINE ZIPPER 34 1 305 - -
Spst5g01370 328 MobiDBLite consensus disorder prediction 284 328 - -
Spst5g01370 328 CDD bZIP_plant_RF2 180 230 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01370 Spst-Chr5 35895561 35898086 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01370 1 257 bZIP Transcription Factor Family AT3G58120 53.265 1.74e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst5g01370 bZIP_1 9.3e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01370 - - gmx:100820197 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01370 5 35895561 35898086 Spst5g01370 5 35895561 35898086 ECH