Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01295 ATGGCTAACTTCTCCAAGGAACGCGGGAACTGTGTCTATGTAGCCAAGTTAGCTGAACAAGCTGAACGCTATGATGAAATGGTGGATGCCATGAAGAAGGTCGCGAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGGAACTTGTTCTCTGTTGGATACAAGAACGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGCGCATCAGGGATTACAGGCACAAGGTGGAGTTGGAGCTGAAGGGAGACTATTACCGGTATTTGGCTGAATTCAAAGCTGGAAATGAAAAGAAAGAGGTAGCAGATCAGTCGCTTAAATCATATCAGGTATTTGATGGAGCTTACACTAAAACTGTTGAGTCATGA 417 0.4532 MANFSKERGNCVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIRDYRHKVELELKGDYYRYLAEFKAGNEKKEVADQSLKSYQVFDGAYTKTVES 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01295 138 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Spst5g01295 138 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Spst5g01295 138 CDD 14-3-3 10 126 - -
Spst5g01295 138 Gene3D - 97 134 IPR036815 -
Spst5g01295 138 PANTHER 14-3-3 PROTEIN 96 126 IPR000308 -
Spst5g01295 138 SMART 1433_4 8 137 IPR023410 -
Spst5g01295 138 Gene3D - 1 96 IPR036815 -
Spst5g01295 138 Pfam 14-3-3 protein 15 98 IPR023410 -
Spst5g01295 138 Coils Coil 14 34 - -
Spst5g01295 138 SUPERFAMILY 14-3-3 protein 7 126 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01295 Spst-Chr5 23411386 23414686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01295 6 127 14-3-3 family AT2G42590 60.784 1.42e-57 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01295 K06630 - gmx:547574 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst5g01295 5 23411386 23414686 Spst5g01295 5 23411386 23414686 ECH