Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01155 ATGAACAAGAACGTATCCGACAACTTGTCGTTGATGACAAGAACCCTTCACTTGATGTGGGGCCTAATGGTTGTCCTCTATTCACATCGGCGCCTTCCCTCTCCCTCCTCTCCTACAACGATGCTCGCACCTACTTCAAGCTCACGTATTGTTCCTACTAACCTCTTTTTTCGTTGTGGCATTTTGTCGAACAGTATGTCAAATGGGGTCTATCGAATGGTGGTTAGTGGTTTTGATGGTTTAGTTTTGAAATTTTTTGAGGTCCCCACAGGTTGGAAGTTCTTTGGTAATTTAATGGATGTTGGATTATGTTCAGTATGTGATGAAGAAAGTTTTGGGACTAGTTCTGATCATATTCACAAGAAAGATGGAATTTGGGCAGTTTTGGAGTATAATAAAATGACTGAACAATTGGGCGTGCTAAAAATAATTGTTGTGCAAGGGAAAAGGTTGGTGATCTGGGATTTCAAGACCAGTGATCCTTATGTTGTGCTCAAACTAGGGAACCAAGTAAATATGATTAACATGTCAATTTCATTTTTAGCTTTTTGA 552 0.3967 MNKNVSDNLSLMTRTLHLMWGLMVVLYSHRRLPSPSSPTTMLAPTSSSRIVPTNLFFRCGILSNSMSNGVYRMVVSGFDGLVLKFFEVPTGWKFFGNLMDVGLCSVCDEESFGTSSDHIHKKDGIWAVLEYNKMTEQLGVLKIIVVQGKRLVIWDFKTSDPYVVLKLGNQVNMINMSISFLAF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01155 183 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 82 133 IPR045244 GO:0004614|GO:0005975
Spst5g01155 183 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 60 135 IPR005846 GO:0005975|GO:0016868
Spst5g01155 183 Gene3D - 58 149 - -
Spst5g01155 183 SUPERFAMILY Phosphoglucomutase, first 3 domains 55 134 IPR016055 GO:0005975|GO:0016868
Spst5g01155 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 137 171 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01155 Spst-Chr5 14731180 14732397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01155 134 174 C2H2 Transcription Factor Family AT3G07940 48.780 5.50e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01155 K01835 - jre:109003961 102.449