Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01154 ATGCCCCAGAAGCGGAAGCAGCACCCTCCTACCACTGAAGATCCTCCAACTGTTTCCTCCTCCGAATCCGAGGAAGATGATGAGCAAGCACCTTCCTCTCAACCGCATGCAGCACCAGCAGAAGTACAGGTTTCATCCTCTGAGGAAGACGATACTTCCCAAGATGAAGACGATGAGCAACGTCCCATTCTCCCTGCTTCTGCACCATCCGACCCACGCCCCAAATTCTCCTCCTCAGAGTCCGAATCCGACACTGACTCCGAACCCACCCCGGCTAAACCCAAACCCGCGGACCAGGCCCAGACCCAGCGTTTCCCCACGCCGGTGAAATCGGGATCCAAGCGCCCCGCCAGCGTTACTGAGCCGAAACGCGCGAAGAAGAAACCAACCGGGGCTCCTTCTTCCTCTGTACCTAATGATGAGGCGGTGGAGGACGGGAAGAAGTCCAGCGGCCAGATGAAGGCGTTCCAGCGGATCTGGAGCAACGAAGACGTGTTAGGGATTTTGAAGGGCATGAGTGAATATATCTCAATGACTGGGCAGGATCCCTACAGGTACGCGGACGCATTCCACAACTTCGTTAAGAAGTCACTCCACCTGGAGGCTTCCAGCAGCCAGCTGAAGGAGAAGATCCGACGCCTGAGGAAGAAGTTCGAGACTCTGGAGCAGAGAGAGAAGCAGGGGCTGGAGCCTCGGTTCGTGTCACCTCAAGACGAGACTGCGTATGAAATCTCCAAGGAGATTTGGGGTGAAGGAGCCAATAGACTGGTGGAAAAGCCCAAGCTTGACAGGAAAGCTGCTAAGACTGCCAAGACTCCCAACAGTAGTGCGACAAAACCCAAACCCAAACCACCGCCGGAGCCATCAGCTCCGCCCCCGGATTTACCGGGGTCGGAAAACCATGATGGTGATGACGTGAGTTTGCTTTACCGCGAGATTTCTCGTTTTCAAGAGCTGGATAAGGATGACATGAAGAAGGGACTGACGCTAATGGGAGAATCGAAGAGGAAGGAATTAGAGGGAAGGTGGAAGATCTTGCGGCATGCTGAGATGGAGCTGCTCGTAAATCGCCATCTACTGATTGCGGAGCAGATTAAGTTGGTATCTGAAGCACTGCTTTCAAGTTCTTGA 1131 0.5411 MPQKRKQHPPTTEDPPTVSSSESEEDDEQAPSSQPHAAPAEVQVSSSEEDDTSQDEDDEQRPILPASAPSDPRPKFSSSESESDTDSEPTPAKPKPADQAQTQRFPTPVKSGSKRPASVTEPKRAKKKPTGAPSSSVPNDEAVEDGKKSSGQMKAFQRIWSNEDVLGILKGMSEYISMTGQDPYRYADAFHNFVKKSLHLEASSSQLKEKIRRLRKKFETLEQREKQGLEPRFVSPQDETAYEISKEIWGEGANRLVEKPKLDRKAAKTAKTPNSSATKPKPKPPPEPSAPPPDLPGSENHDGDDVSLLYREISRFQELDKDDMKKGLTLMGESKRKELEGRWKILRHAEMELLVNRHLLIAEQIKLVSEALLSSS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01154 376 MobiDBLite consensus disorder prediction 259 304 - -
Spst5g01154 376 Coils Coil 204 224 - -
Spst5g01154 376 MobiDBLite consensus disorder prediction 1 155 - -
Spst5g01154 376 MobiDBLite consensus disorder prediction 77 91 - -
Spst5g01154 376 Pfam Protein of unknown function, DUF573 156 250 IPR007592 GO:0006355
Spst5g01154 376 MobiDBLite consensus disorder prediction 278 295 - -
Spst5g01154 376 PANTHER BNAANNG10740D PROTEIN-RELATED 35 370 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01154 Spst-Chr5 14705183 14706313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01154 77 371 GeBP Transcription Factor Family AT1G61730 30.938 6.69e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Spst5g01154 DUF573 1.3e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01154 - - vun:114182157 382.874