Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01153 ATGGCGATAGATGGCATGGCTGGCTATATCCTTGCGGGGTCTCAGGCCTACACGTTCTACGTTGGTGAAAAAGATGGATGGGTTTTGTACCCTTCTGAGAATTACAATCACTGGGCTGAAAGGATGAGGTTCCAAGTCAGCGACACTCTTGTTTTTAAGTACAAGAAGGGATCGGACACGGTTTTGGTGGTGAACAAGGAGGATTATGAGAGATGTAACAAGAATAACCCGATCAAGAAGTTTGAGGATGGTGACTCGGAGTTTCAGTTTGACCGGTCGGGTCCTTTTTACTTCATCAGTGGAAAAGATGGTAACTGTGAGAAGGGTCAGAAACTGATTATTGTGGTTTTGGCTGTGAGAGAGCCTCCACCATATTCTCCAACACCTCCAAACGCTCCCTATGTTCCAACTCCTCCAAAGGTTCCTTACCATCCCCCTTATGTTCCAATTCCTCCTCAAATTCCCCCTCCTCCAAAAACTCCTTATCCACCTCATGTTCCAACCCCACCTCAAACACCTTCCCCTGTTTATAGTCCTCCCAGTGTTCCAACCCCTCCAAAAGTGCCTTCACCTATTCATTATCCACCTTATGTTCCAAGACCTCCAAAATCTCCATCCCCTACTTATAGTCCTCCCATTGTTCCTCCTACTCCTCCAAAAGCACCTTCACCTACTTATCATCCACCCCATGTTCCAACACCTCCACAAACTCCTTCTCCAGTTTATACTCCTCCCAATGTTCCACCAAATGTTCCACTTCCTCCAAAAGCTCCTTCCCCAGGTAACCATCCACATCCACCCTATGTTCCAACACCTCCCAAAGCACCTTCTCCTACTTATAGTCCTCCTAATGTTCCTTATCCTCCAAAAGCTCCTTCCCCTAATAACCATCCACCCTATGTTCCTACACCTCCGAACACACCTTCTCCTACTTATAGTCCTCCAAATGTTCCCACTCCTCCAAAAACACCTTCCCCCACATATGGTCCTCCAAATGCTCCTTCCCCTGGTAACCATCCACCCTATGTTCCTTCACCTCCAAAAACACCTTCTCCAACTTATAGTCCTCCAAGTGTTCCCACCCCTCCAAAAACTCCTTCCCCTGCCCACCAACCTTATGCCCCAATTCCTCCAAACACTCCATCTCCTGTCTCCCAACCTCCCTATACTCCAACCCCTCCAAAAACCCCTTCCCCTACCCATCAACCCCCCATTGTTCCAGTAACTCCATCACCATTTTCTCAACCACCTTATGTTCCACAACCACCGAAAACTCCTTCTCCTACATCCCAACCTCCTTACATCCCGTCACCTCCAAACACTCCCTCTCCAATATCCCAACCACATTACATTCCAACACCGCCAAAAACTCCTTCTCCTACTGGCCAACCTCCCTACATTCCAACACCTCCAAACACTCCTTCCCCAACATCTCAGCCCCCTTACATTTCCACACCTCCAACAACCACTCCTTCCCCAACATCTCAACCACCCTACCCTTATGCCCCCACTCCAAAACCCAATTCCCCTATCCCCCTCCCTCCATCATCATCCCCAACTTCCCAATCACCACTCTCACCAACATCACCCTATCCATCCACCATCCCAACTCCATCATACCCACCGACACTTTCACTTGCACCCACTTACCCACCTTCCCCCTTAGCCCCGGCTAATACTCCGCTTCCCTCCACTACATCGCCACCATCGCCTTCTCCGGCAACCGCCACTTCTCCTCGGGCGTCACTTTCGCCAGCAACAACTCTTTCGCCATCGTCTTCCTCAGAATCGTCTTCGAACGAAACGACGCCGGCCCGGCCGAGCGGCGCGTCGTCTGTAGCGGCGCCGCGTTTAGGAGCGTACTCACTAACCATTCTCGTCGGTGCTGCTCTTAGTACCATTCTTGGTTAG 1911 0.5024 MAIDGMAGYILAGSQAYTFYVGEKDGWVLYPSENYNHWAERMRFQVSDTLVFKYKKGSDTVLVVNKEDYERCNKNNPIKKFEDGDSEFQFDRSGPFYFISGKDGNCEKGQKLIIVVLAVREPPPYSPTPPNAPYVPTPPKVPYHPPYVPIPPQIPPPPKTPYPPHVPTPPQTPSPVYSPPSVPTPPKVPSPIHYPPYVPRPPKSPSPTYSPPIVPPTPPKAPSPTYHPPHVPTPPQTPSPVYTPPNVPPNVPLPPKAPSPGNHPHPPYVPTPPKAPSPTYSPPNVPYPPKAPSPNNHPPYVPTPPNTPSPTYSPPNVPTPPKTPSPTYGPPNAPSPGNHPPYVPSPPKTPSPTYSPPSVPTPPKTPSPAHQPYAPIPPNTPSPVSQPPYTPTPPKTPSPTHQPPIVPVTPSPFSQPPYVPQPPKTPSPTSQPPYIPSPPNTPSPISQPHYIPTPPKTPSPTGQPPYIPTPPNTPSPTSQPPYISTPPTTTPSPTSQPPYPYAPTPKPNSPIPLPPSSSPTSQSPLSPTSPYPSTIPTPSYPPTLSLAPTYPPSPLAPANTPLPSTTSPPSPSPATATSPRASLSPATTLSPSSSSESSSNETTPARPSGASSVAAPRLGAYSLTILVGAALSTILG 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01153 636 PANTHER BLUE COPPER PROTEIN 17 183 IPR039391 GO:0009055
Spst5g01153 636 Pfam Plastocyanin-like domain 27 110 IPR003245 GO:0009055
Spst5g01153 636 CDD OsENODL1_like 17 117 IPR041846 -
Spst5g01153 636 MobiDBLite consensus disorder prediction 152 615 - -
Spst5g01153 636 Gene3D - 15 120 IPR008972 -
Spst5g01153 636 ProSiteProfiles Phytocyanin domain profile. 17 118 IPR003245 GO:0009055
Spst5g01153 636 FunFam Early nodulin-like protein 1 16 121 - -
Spst5g01153 636 MobiDBLite consensus disorder prediction 152 575 - -
Spst5g01153 636 MobiDBLite consensus disorder prediction 576 609 - -
Spst5g01153 636 SUPERFAMILY Cupredoxins 16 117 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01153 Spst-Chr5 14625379 14627802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01153 10 182 Phytocyanin Superfamily AT5G53870 47.778 2.50e-47 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01153 - - gmx:100809181 221.09