Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01147 ATGGAAACCAAGCAAGGAGAGGGTGGGAGGTGGGGACTGAGGGATCTCGCACCCTCTGCTTGTGTTGTTGATTGTTGTCACACTTTCATTTTTTTAATGGCCACTGTTGGTTGCTTCGTCCGCAAGCTGTTGACGTATGATCTCTTGTTCTTGGGATTTGGTTTTGGTGGGGATTGGGGATCCAAATCTTTACCTTCAAATTGGGGCTTTCCTTTGCAAGCAATGGTGCTGCTCAAATGTTGCTTAGTGACACTCTTGCAATGGTGTTTCTTGGCTTGCTTAATTTGCTTGTCAGTAGGGATTAATAATAATCAAGCCCCCTGTGACCCTCGTGATTTATCAGCTCTGAAGAAGTTTGTAGGCAACCTTACAAGCGGGTCTATCATCACAGCATGGTCCAATGACAGTCTCTGCTGCAACTGGCGTGGAGTTGTTTGTGATAATGTGATTGGAGGCGGTGGAACAGTTACTAGTAGAGTGACCAAGTTGATCCTGCCTGAAATGGGTCTCAATGGTACAATTTCACCCTCTTTAGCGCAGCTAGATCAGCTCAATGTGCTGAATCTTTCATTGAATCACCTTAAAGGTGGATTGCCTGTGGAGTTCTCCCAGTTGAAGCTGTTGAAGTTCCTTGATGTGAGCCATAATATGCTGTCTGGGCCTGTTGGTGGAGCTCTTTCTCGTTTACGATCCATTGAAGTGTTGAATATTTCTAGTAATTTACTTTCTGGAGTTCTCTTCCCTTTTGGGGAATTCCCTCATCTCCTTGCTCTCAATGTGAGCAACAATTCATTCACTGGCATATTCAGTTCACAAATTTGCAGTGCTACCGAGGATCTTCAAACCCTTGATTTGTCAGCAAATAATTTTATTGGTGATCTTGAGGCATTGAATAACTGCCCCACATCTCTCCAACAGTTGCATTTGAATTCCAATTCATTTACTGGCCGTCTTCCAGATTCCTTGTATTCATTGTCAGCCTTGGAGGAACTCTCAGTCTCTGCCAACAATTTATCTGGCCAGTTAAGCGTGCAACTAAGTAAGCTCTCTAACCTAAAAATTCTGGTGCTTTGTGGAAACAGGTTTTCTGGAGAACTTCCAAATGTTTTTGGGAATCTTTTGCAGCTAGAAGAATTAGAAGCACACGGCAATTCATTTTCTGGACCCTTGCCCTCCGCCTTGGCTTTATGCTCTAAGCTTAGGGTGCTTAACCTTCGAAATAATTCATTGTCTGGGCCTATTGATCTGAATTTCACTGGTTTGTCTAATCTTCAAACACTCGACCTTGCTACTAATCATTTCACTGGACACCTTCCAACTTCCCTGTCCTATTGTCGTGAGTTGAAGGTTTTAAGCGTTGCTAGGAATGGTTTAACTGGTTCTGTCCCTGAAAACTATGCAAACCTCAGTGCGCTTTTGTTTGTATCCTTGTCAAACAACAGCATTGAGAACTTATTCCGCGCAGTGTCTGTTTTGCAGCAGTGCAAAAATCTCACGACTCTTATCCTCACTAAGAATTTCCATGGTGAGGAAATTCCAGAAAGTGTCTCTGTGGGATTTGAGAGCCTTATGATTTTAGCACTTGGAAACTGTGGTCTTAAAGGCCACATCCCTTCTTGGTTATCCAATTGCAGGAAGTTAGCAGTTCTTGACTTGTCTTGGAACCATTTGAATGGTAGTGTTCCTTCTTGGATTGGTCAGATGAACAGTTTGTTCTATATGGATTTCTCAAATAATTCTCTGACAGGAGAAATACCAAAAAGTTTGACAGAGTTGAAGGGCCTCATGTGTGCAAACTGTAATAGAGCAAATCTTGCTGCCTTTGCATTCATTCCTCTCTTTGTTAAGAGAAACACAAGTGCAAGTGGACTGCAGTATAACCAAGCCTCAAGTTTCCCACCTTCAATTTACTTGAGCAATAACATATTGAGTGGAAATATATGGCCCGAAATTGGACAATTGAAAGCACTCCATGTCTTGGATTTAAGCAGGAACAACATCACTGGTACCATTCCTAGCACTATTTCAGAGATGGAGAACTTGGAAACCTTAGATTTGTCTTATAATGATCTCTCTGGAGAGATTCCTCCATCATTTAACAATCTCACATTCTTGTCAAAGTTCAGTGTTGCATATAATCGATTAGATGGATCAATCCCAACTGGGGGTCAATTTTTAAGCTTTCCAAGTTCAAGCTTTGAGGGCAACATGGGGCTTTGTAGGGAAATTGATTCTCCTTGCAAAATTGTCAACAATACAAAGCCCATCATTTCTTCCGGTTCTTCAAAAAAGCTTGGTAGAAGCAATGTCCTTGGCATAACAATCAGTATAGGGATAGGGCTTGCACTGCTTCTTGCAATTATTCTGCTGAGAATGTCAAGGAGGGATGACGATAAGCCCATGGATAACTATGATGAGGAACTCAATAGCAGGCCACACAGGTTATCTGAGGCACTTGTTTCCTCAAAGTTGGTGCTCTTCCAGAATTCAGATTGCAAGGATCTTACAGTTGCAGATTTATTAAAATCCACAAACAATTTTAACCAGGCAAATATTATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCATATCTTCCAAATGGCACAAAAGCAGCTATCAAGAGACTTTCAGGGGATTGTGGTCAGATGGAACGTGAATTTCAAGCTGAAGTAGAGGCCCTCTCAAGAGCTCAACACAAGAACCTTGTTTCTCTGAAAGGATATTGTCGGCATGGTAATGACAGATTGCTAATATACTCGTACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGAAAGCTCAGCTCTAAAATGGGATGCAAGACTCAAGATTGCACAAGGGGCTGCACGAGGATTAACTTACTTGCATAAGGGGTGTGAACCATTCATAGTGCATCGTGATGTTAAATCTAGCAACATTCTTTTGGATGACAAATTTGAAGCTCATTTGGCTGATTTTGGTCTCTCACGACTACTTCAACCATACGACACTCATGTCACAACCGACTTGGTAGGAACTTTAGGATATATTCCTCCAGAATATAGTCAGACACTGACAGCGACCTTCAGGGGTGATGTTTATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTAACTGGTAGAAGGCCTGTGGAAGTCATCAAGGGGAAAAATTGCAGAAATCTGGTTTCTTGGGTGTTTCAAATGAAATCTGAGAATAAGGAGCAGGAAATATTTGATCCAGCAATTTGGCATAAGGATCATGAGAAACAGCTGCTGGAGGTGTTTGCCATTGCTTGTAAATGTCTAAACCAAGATCCTAGGCAGAGGCCCTCTATTGAAGTAGTTGTTTCATGGCTTGATAGTGTGAGATTTGATGGTTCTCAACAGTGA 3387 0.4198 METKQGEGGRWGLRDLAPSACVVDCCHTFIFLMATVGCFVRKLLTYDLLFLGFGFGGDWGSKSLPSNWGFPLQAMVLLKCCLVTLLQWCFLACLICLSVGINNNQAPCDPRDLSALKKFVGNLTSGSIITAWSNDSLCCNWRGVVCDNVIGGGGTVTSRVTKLILPEMGLNGTISPSLAQLDQLNVLNLSLNHLKGGLPVEFSQLKLLKFLDVSHNMLSGPVGGALSRLRSIEVLNISSNLLSGVLFPFGEFPHLLALNVSNNSFTGIFSSQICSATEDLQTLDLSANNFIGDLEALNNCPTSLQQLHLNSNSFTGRLPDSLYSLSALEELSVSANNLSGQLSVQLSKLSNLKILVLCGNRFSGELPNVFGNLLQLEELEAHGNSFSGPLPSALALCSKLRVLNLRNNSLSGPIDLNFTGLSNLQTLDLATNHFTGHLPTSLSYCRELKVLSVARNGLTGSVPENYANLSALLFVSLSNNSIENLFRAVSVLQQCKNLTTLILTKNFHGEEIPESVSVGFESLMILALGNCGLKGHIPSWLSNCRKLAVLDLSWNHLNGSVPSWIGQMNSLFYMDFSNNSLTGEIPKSLTELKGLMCANCNRANLAAFAFIPLFVKRNTSASGLQYNQASSFPPSIYLSNNILSGNIWPEIGQLKALHVLDLSRNNITGTIPSTISEMENLETLDLSYNDLSGEIPPSFNNLTFLSKFSVAYNRLDGSIPTGGQFLSFPSSSFEGNMGLCREIDSPCKIVNNTKPIISSGSSKKLGRSNVLGITISIGIGLALLLAIILLRMSRRDDDKPMDNYDEELNSRPHRLSEALVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKAYLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDESSALKWDARLKIAQGAARGLTYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVFQMKSENKEQEIFDPAIWHKDHEKQLLEVFAIACKCLNQDPRQRPSIEVVVSWLDSVRFDGSQQ 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01147 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 969 981 IPR008271 GO:0004672|GO:0006468
Spst5g01147 1128 Pfam Leucine rich repeat N-terminal domain 111 147 IPR013210 -
Spst5g01147 1128 Gene3D Ribonuclease Inhibitor 247 340 IPR032675 -
Spst5g01147 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 319 414 - -
Spst5g01147 1128 Gene3D Transferase(Phosphotransferase) domain 1 923 1124 - -
Spst5g01147 1128 PRINTS Leucine-rich repeat signature 657 670 - -
Spst5g01147 1128 PRINTS Leucine-rich repeat signature 678 691 - -
Spst5g01147 1128 SUPERFAMILY L domain-like 288 586 - -
Spst5g01147 1128 SMART serkin_6 847 1118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01147 1128 Pfam Protein kinase domain 848 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01147 1128 ProSitePatterns Protein kinases ATP-binding region signature. 853 875 IPR017441 GO:0005524
Spst5g01147 1128 FunFam Tyrosine-sulfated glycopeptide receptor 1 418 752 - -
Spst5g01147 1128 ProSiteProfiles Protein kinase domain profile. 847 1123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01147 1128 SUPERFAMILY L domain-like 521 721 - -
Spst5g01147 1128 Pfam Leucine rich repeat 656 715 IPR001611 GO:0005515
Spst5g01147 1128 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Spst5g01147 1128 SMART LRR_typ_2 349 372 IPR003591 -
Spst5g01147 1128 SMART LRR_typ_2 421 445 IPR003591 -
Spst5g01147 1128 SMART LRR_typ_2 469 492 IPR003591 -
Spst5g01147 1128 SMART LRR_typ_2 181 205 IPR003591 -
Spst5g01147 1128 SMART LRR_typ_2 654 677 IPR003591 -
Spst5g01147 1128 SMART LRR_typ_2 678 701 IPR003591 -
Spst5g01147 1128 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 371 1111 - -
Spst5g01147 1128 SUPERFAMILY L domain-like 132 341 - -
Spst5g01147 1128 Gene3D Phosphorylase Kinase; domain 1 810 922 - -
Spst5g01147 1128 CDD STKc_IRAK 853 1119 - -
Spst5g01147 1128 Gene3D Ribonuclease Inhibitor 111 230 IPR032675 -
Spst5g01147 1128 ProSiteProfiles Leucine-rich repeat profile. 680 702 IPR001611 GO:0005515
Spst5g01147 1128 ProSiteProfiles Leucine-rich repeat profile. 279 301 IPR001611 GO:0005515
Spst5g01147 1128 SUPERFAMILY Protein kinase-like (PK-like) 829 1118 IPR011009 -
Spst5g01147 1128 FunFam Leucine-rich repeat receptor-like kinase 111 231 - -
Spst5g01147 1128 Gene3D Ribonuclease Inhibitor 443 754 IPR032675 -
Spst5g01147 1128 FunFam Phytosulfokine receptor 1 810 922 - -
Spst5g01147 1128 Gene3D Ribonuclease Inhibitor 341 442 IPR032675 -
Spst5g01147 1128 FunFam Leucine-rich repeat receptor-like protein kinase 923 1128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01147 Spst-Chr5 14334774 14339694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01147 127 414 Receptor kinase-like Gene Family AT1G55610 27.609 5.01e-13 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Spst5g01147 Pkinase 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01147 - - gmx:100797812 1844.32