Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01137 ATGGCTGACGTAGCAGGTCTAGTTGACGTTTCGGGATCAAGATTCACTTCATTAGAGCTTATTGGGCAGGGATCGTTTGGGGACGTCTATAAAGCGTTTGACAGGGAGCTCAACAAAGAAGTCGCTATCAAAGTAATCGACTTGGAAGAATCAGAGGATTTTACCATTATTAGAGGTTCTCAGGGAATGTTTGAATGCATTATGGAGCTTGCAAAATTCAAAGAGTCAAAAAGGCTGAAGTGGAGTGACCAGAGCCTCTTCATCTTCTTTCTTAGTAAATTACATATGGGAAAAGGTGAAATGAGGGTGAGCTTAACTTGGGGAGAAGCATTTGGACTCCAGAAAGAAATAGAGATTTTCTGTCGTACAAGAGAGGACGAAATTGATGATATCCAAAAGGAAATTTCTGTTTTGTCCCAATGTCGATGTCCATACATTACTGAGTATTATGCTTCCTATATCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGGGGCTCAGTTGCTGATCTACTCCAAGCAGGTCATCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGATTTGCTGCATGCTGTTGATTATCTGCACAGTGAAGGGAAAATTCACAGAGACATTAAAGGTATCCGCAGCAACCCCGCCACCTTTGAATTTTGTTTACTTGTCAATTATACAGCTGCAAACATTTTATTGACTGAGAATGGTGATGTAAAGGCAGATATTTGGTCTTTGGGGATCACTGCTATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCAATGAGAGTGCTTTTCATCATACCCCGGGAGAGTCCTCCACAGAGGCCAAGTGCTAAGGAACTTCTCAAGGACCGTTTTATTCGGAATGCTAGGAAGAGTTCAAAGCTTGCAGAAAGAATAAGGGAGCGTCCAAAATACCAAATGAAGGAAGAAGACCAGGAAACACCTAGAAATGTCTCAAGAGGGATGCGGGAGGCATCAGATACTGTAAAAGTGGCAAGAGATGTAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAATATTGGTGGATCGCATGGTACTGGAACCTTTCGAAGTGTTTCTCGGCCACCTCAGTTTAGAGAGAAAAAGATTGAAGTTTCACATAATCAGCTAACCCAAAGAAAACCTCCAGAGAGTTGTTATCAAGGAGGATCTGCCAATAGAAGTGCACTTAATGAGCCACTTGAAAGTTCTGCTAGAAGAGATATTAGAGTTCCCCACCATGATGAGCATCTGGATAATCACCTTGAAGATGTAAATGATTCTTACTCTGATGAATTATCTGGAAACGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAAGTCATCTGTATTCGGTGACCATAGCTCTCGGTCTAGTAGCATCTATGCTTCATTTGATGATGCTTCTACAAGTGGGACTGTTGTTGTACGTGGCCAGCATGATGAGCCTGATTCTCCACAGCCACTAAGGTCACGATTGGGACTTAATGACAGAAATTCAAATGCCTCAATGGAAGATAGTGCGGCAAATCTTGCTGAGTTTGTTTTGTCGGAGGCAAAGGTTGCTATGCAAGGAGGGCTCAGGAAAGTGAGTTCTCGAGAGAGATTGGCCTGGGGAAAAGTCAACAATGAAAGACAGGAAGAGAAGAAAGATCGAAAGACTAGCAGCGCTGATTCTTCAAGACTTTACGGCGAATATGATGCACACACGGGCATATTAAGATCACATCATGCTAGTATTGATGAAGGAAGTTCTAAAATAATGTCTTCGTCAGTGCCATTATCTGTTCTACTTGTTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTCAATTGTGCGGGCAGTGATCAATTCTTTTATAAACATGGAGGGCACAAAACCTAAATCCTGTGATGTTTTCGTGAAACAGTTGCTTCACCGATTGGCAAGTTCAAAGGAAGATTCACTGAAGGACCTGCGGGGACTAGCGGTCCAACTATTTAGCAAGACCAGGTCCACCGAAGAAACCCGAAATGCAGAGGCTGATGACCGGAATAAACAACAAAACAATAGCAATTTAAGTCCACTAGCAAGATTTCTTCTCTCGAGATGGCATGGCCAAACCTCACGGTATCTAAACTCATCTTGA 2205 0.4263 MADVAGLVDVSGSRFTSLELIGQGSFGDVYKAFDRELNKEVAIKVIDLEESEDFTIIRGSQGMFECIMELAKFKESKRLKWSDQSLFIFFLSKLHMGKGEMRVSLTWGEAFGLQKEIEIFCRTREDEIDDIQKEISVLSQCRCPYITEYYASYINQTKLWIIMEYMAGGSVADLLQAGHPLDEMSIACILRDLLHAVDYLHSEGKIHRDIKGIRSNPATFEFCLLVNYTAANILLTENGDVKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQRPSAKELLKDRFIRNARKSSKLAERIRERPKYQMKEEDQETPRNVSRGMREASDTVKVARDVRGEENNRPSDQGKTLKSAGWDFNIGGSHGTGTFRSVSRPPQFREKKIEVSHNQLTQRKPPESCYQGGSANRSALNEPLESSARRDIRVPHHDEHLDNHLEDVNDSYSDELSGNGSGTVVIRSPKGSKSSVFGDHSSRSSSIYASFDDASTSGTVVVRGQHDEPDSPQPLRSRLGLNDRNSNASMEDSAANLAEFVLSEAKVAMQGGLRKVSSRERLAWGKVNNERQEEKKDRKTSSADSSRLYGEYDAHTGILRSHHASIDEGSSKIMSSSVPLSVLLVPSLKEAIADDPEGSIVRAVINSFINMEGTKPKSCDVFVKQLLHRLASSKEDSLKDLRGLAVQLFSKTRSTEETRNAEADDRNKQQNNSNLSPLARFLLSRWHGQTSRYLNSS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01137 734 MobiDBLite consensus disorder prediction 499 527 - -
Spst5g01137 734 MobiDBLite consensus disorder prediction 564 581 - -
Spst5g01137 734 MobiDBLite consensus disorder prediction 334 353 - -
Spst5g01137 734 Gene3D Transferase(Phosphotransferase) domain 1 165 214 - -
Spst5g01137 734 MobiDBLite consensus disorder prediction 396 420 - -
Spst5g01137 734 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Spst5g01137 734 SUPERFAMILY Protein kinase-like (PK-like) 13 311 IPR011009 -
Spst5g01137 734 MobiDBLite consensus disorder prediction 690 711 - -
Spst5g01137 734 MobiDBLite consensus disorder prediction 564 584 - -
Spst5g01137 734 Gene3D Transferase(Phosphotransferase) domain 1 215 331 - -
Spst5g01137 734 Gene3D Phosphorylase Kinase; domain 1 113 164 - -
Spst5g01137 734 Gene3D Phosphorylase Kinase; domain 1 7 71 - -
Spst5g01137 734 MobiDBLite consensus disorder prediction 304 328 - -
Spst5g01137 734 MobiDBLite consensus disorder prediction 436 487 - -
Spst5g01137 734 Pfam Protein kinase domain 125 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01137 734 MobiDBLite consensus disorder prediction 449 487 - -
Spst5g01137 734 ProSiteProfiles Protein kinase domain profile. 15 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01137 734 MobiDBLite consensus disorder prediction 304 424 - -
Spst5g01137 734 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 240 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01137 Spst-Chr5 13010106 13026771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01137 132 731 MAP Kinase Kinase Kinase Kinase AT3G15220 50.744 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Spst5g01137 Pkinase 3.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01137 K08838 - gmx:100815042 887.871