Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01129 ATGGATAGCTATGAGGTGATAGTGTGGAGCTCTCTCTTACTTTCTTCCTTCATACCCACCATCACTGCACTGAGCAGTATCACTCCAAATCAGCCCTTGCATCACAATCAAACCCTGGTTTCAGCATCTGGAACTTTTGAAGCAGGATTTTTTAGCACTGGAAGTTCCCAGAGACATTACTTTTGCATATGTTACAAGAATATATCACCTAGAACAATTGTTTGGGTGGCCAACAGAAACACCCCATTGGATAACTCCACAGGGGTTTTCAAAGTCAGTGATGAGGGGGATCTTGATGTACTTGATGGCACTGGTGCAAGTGTTTGGTCATCCAATGCATCAACCACTGCTCAGAAGCCTATTGTGAAGCTCTTGGACTCTGGCAACCTTGTTGTGAAAGATGGTGGTACTAATGCCCCAGTGAAGGTTGTGTGGGAAAGCTTTGATTATCCTGGTGACACTTTACTTCCCGGGATGAAACTCAAAAGCAGTTTTGTGACAGGAGCACATAGTTCTCTGACATCATGGAGGGACACAGAAGATCCTGCTCTGGGGGAATTTTCATTGTATATTGATCCTCATGGTTTTCCTCAGAGAGTAACTACAAAGGGAGGGACTTGGTTGTATAGAGCAGGTTCGTGGAATGGTTATCAATTTTCAGGAGTTCCTTGGCAACTGTTGCATAAGTTCTTCAATTACTATTTTGTGTTAACCAAGGAGGAAGTGTATTATGAGTACGAACTCTTGGAACGTTCTGTTGTTACAAGGTTTGTGATCAACCAAGCAGGTAGCGATCAACGTTTCACATGGTCAGAGAGGACAAAGAGTTGGGAGCTGTTTGCCTCAGGCCCCAGGGAACAGTGTGAAAACTATGCCTTGTGTGGTTCAAATTCTGTTTGCAATGTTAATAGAAACCCCATATGTGAATGCTTGGAGGGTTTTCTTCCCAAGTTCACAGAAAAGTGGAGATCATTGGATTGGTCTGATGGGTGTGTTCGGAGAATGAATCTGAGTTGCGACAATGAAGATGGATTTGTTAAGTATGAGGGAATGAGATTGCCAGACACATCTTCCTCCTGGTTTGACACAAGCATGAGCCTTGCTGAATGTGAGAGAGTGTGTTTGCAAAACTGCTCTTGCACAGCATACACAAACTTAGATGTGAGAGGTGGAGGGAGTGGCTGCCTACTTTGGTTTGGTAACATTGTGGATATGGGAAAACATATCTCCCAAGGACAAGACATTTACATACGAATTGCTGCTTCGGATATAGACAATACTTGGCATAAAAGGCACATTAACAAGAAGCTTGTTGTGATTTTGACAGCAATTGCTACGTTCATCATAGTCATAATATTAGGATCAGTCATATACATACGGAAAAAACTTGAGAAGCAAGGAAAGACAAATACAATCGACCAGATATCTCACACTATGAAACACGGGAAGAAAGATATTGATTTGCCAACCCTTGATTTATCAACCATTGATAATGCCACTCGTAACTTCTGTACCAGTAACATATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTGTTCTGGCAAATGGACTAGAGATAGCTGTTAAGAGGCTTTCCAAAACTTCTGGACAAGGATTAGACGAGTTCAGAAATGAAGTTGTGTTGATTGCCAATCTTCAGCACCGCAATCTTGTAAAGATTCTAGGTTGTTGTGTTCAAGACGAGGAGAGAATCTTGATCTATGAATTCATGCCTAATAGGAGCTTGGATCTTTACATTTTTG 1768 0.4208 MDSYEVIVWSSLLLSSFIPTITALSSITPNQPLHHNQTLVSASGTFEAGFFSTGSSQRHYFCICYKNISPRTIVWVANRNTPLDNSTGVFKVSDEGDLDVLDGTGASVWSSNASTTAQKPIVKLLDSGNLVVKDGGTNAPVKVVWESFDYPGDTLLPGMKLKSSFVTGAHSSLTSWRDTEDPALGEFSLYIDPHGFPQRVTTKGGTWLYRAGSWNGYQFSGVPWQLLHKFFNYYFVLTKEEVYYEYELLERSVVTRFVINQAGSDQRFTWSERTKSWELFASGPREQCENYALCGSNSVCNVNRNPICECLEGFLPKFTEKWRSLDWSDGCVRRMNLSCDNEDGFVKYEGMRLPDTSSSWFDTSMSLAECERVCLQNCSCTAYTNLDVRGGGSGCLLWFGNIVDMGKHISQGQDIYIRIAASDIDNTWHKRHINKKLVVILTAIATFIIVIILGSVIYIRKKLEKQGKTNTIDQISHTMKHGKKDIDLPTLDLSTIDNATRNFCTSNILGEGGFGPVYKGVLANGLEIAVKRLSKTSGQGLDEFRNEVVLIANLQHRNLVKILGCCVQDEERILIYEFMPNRSLDLYIF 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01129 589 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Spst5g01129 589 Gene3D Hepatocyte Growth Factor 335 417 - -
Spst5g01129 589 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 578 - -
Spst5g01129 589 SUPERFAMILY Protein kinase-like (PK-like) 485 588 IPR011009 -
Spst5g01129 589 Pfam D-mannose binding lectin 72 177 IPR001480 -
Spst5g01129 589 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Spst5g01129 589 Gene3D Phosphorylase Kinase; domain 1 460 578 - -
Spst5g01129 589 Pfam PAN-like domain 339 405 IPR003609 -
Spst5g01129 589 SMART blect_4 30 151 IPR001480 -
Spst5g01129 589 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Spst5g01129 589 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Spst5g01129 589 CDD PAN_AP_plant 336 420 - -
Spst5g01129 589 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Spst5g01129 589 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 588 - -
Spst5g01129 589 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Spst5g01129 589 Pfam Protein tyrosine and serine/threonine kinase 506 588 IPR001245 GO:0004672|GO:0006468
Spst5g01129 589 SUPERFAMILY Hairpin loop containing domain-like 341 413 - -
Spst5g01129 589 Gene3D - 21 148 IPR036426 -
Spst5g01129 589 ProSiteProfiles Protein kinase domain profile. 503 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst5g01129 589 SMART ntp_6 340 419 IPR003609 -
Spst5g01129 589 CDD B_lectin 30 151 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01129 Spst-Chr5 12899089 12901627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01129 421 589 Receptor kinase-like Gene Family AT4G23190 48.555 2.35e-40 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst5g01129 S_locus_glycop 4.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01129 - - vum:124842963 1089.72