Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst5g01118 ATGGATTCCGACAACGAGTTCCCCCAGCCTTCTTACAGAGAGCGTGAAGCTATAAGGGATTACCTCCAGATTGAGTATGAATTCATGCCCCCCTTGGAGTTTTATGCAAATCCATTCAATGTTCAGTATCGGAGACATGCTGTTTCCACTATGGTTAGGCTCTCTCAGGGCGAAGATGTTGATGCGTATATTCCCTACCTTGCAATGAATTACTTTGATCGCTTTGTTTCAATGAATCCGCTTGCAGAATTACGAGGTTTTTCTTTACACGATAAAGTTCGTTTGGTTGCCATCTGTTGCTTCACACTCTCCGCCAAGATGAGAACAACGCATTTCTTACCACGGCAGTTTCAGATGAACAGAGAAGTGAATTTCAACTCTGAAAAGATAATGCAAACGGAATTTTGCATTCTCAATGGACTTAACTGGCGAATGAGATCTATTACTCCCTTTCACTTCTTGGACCACTATTATCCCACCTTCAGAATGATAGGTGGTTTCAAACGCCGATCCATCAATGAGATCATAGTCCAGTCTCAAGGAGGTATCGTAATAAGAGTTGTCTGA 567 0.4233 MDSDNEFPQPSYREREAIRDYLQIEYEFMPPLEFYANPFNVQYRRHAVSTMVRLSQGEDVDAYIPYLAMNYFDRFVSMNPLAELRGFSLHDKVRLVAICCFTLSAKMRTTHFLPRQFQMNREVNFNSEKIMQTEFCILNGLNWRMRSITPFHFLDHYYPTFRMIGGFKRRSINEIIVQSQGGIVIRVV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst5g01118 188 PANTHER CYCLINS 19 158 IPR039361 -
Spst5g01118 188 SMART cyclin_7 49 139 IPR013763 -
Spst5g01118 188 Gene3D - 21 159 - -
Spst5g01118 188 Pfam Cyclin, N-terminal domain 39 145 IPR006671 -
Spst5g01118 188 SUPERFAMILY Cyclin-like 11 145 IPR036915 -
Spst5g01118 188 Gene3D - 31 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst5g01118 Spst-Chr5 12724029 12725502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst5g01118 24 163 Core Cell Cycle Gene Families AT4G03270 31.250 3.20e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst5g01118 - - var:108332810 213.001